The biogeography of mitochondrial and nuclear discordance in animals

Local Adaptation along Smooth Ecological Gradients Causes Phylogeographic Breaks and Phenotypic Clustering

(2012) Darren E. Irwin   AMERICAN NATURALIST

The cybrid invasion: widespread postglacial dispersal by Phoxinus (Pisces: Cyprinidae) cytoplasmic hybrids

(2012) J.A. Mee et al.   CANADIAN JOURNAL OF ZOOLOGY

Heavily male-biased long-distance dispersal of orang-utans (genus:Pongo), as revealed by Y-chromosomal and mitochondrial genetic markers

(2012) PIRMIN NIETLISBACH et al.   MOLECULAR ECOLOGY

Speciation in theRana chensinensisspecies complex and its relationship to the uplift of the Qinghai-Tibetan Plateau

(2012) WEI-WEI ZHOU et al.   MOLECULAR ECOLOGY

Genetic Introgression: An Integral but neglected component of speciation in birds

(2011) Frank E. Rheindt et al.   AUK

A cryptic contact zone between divergent mitochondrial DNA lineages in southwestern North America supports past introgressive hybridization in the yellow-rumped warbler complex (Aves: Dendroica coronata)

(2011) BORJA MILÁ et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

The intriguing evolutionary dynamics of plant mitochondrial DNA

(2011) Nicolas Galtier   BMC BIOLOGY

Introgression of mitochondrial DNA among Myodes voles: consequences for energetics?

(2011) Zbyszek Boratyński et al.   BMC EVOLUTIONARY BIOLOGY

Ancient Hybridization and an Irish Origin for the Modern Polar Bear Matriline

(2011) Ceiridwen J. Edwards et al.   CURRENT BIOLOGY

A TIGHT BALANCE BETWEEN NATURAL SELECTION AND GENE FLOW IN A SOUTHERN AFRICAN ARID-ZONE ENDEMIC BIRD

(2011) Ângela M. Ribeiro et al.   EVOLUTION

SCALE-SPECIFIC SEX-BIASED DISPERSAL IN THE VALAIS SHREW UNVEILED BY GENETIC VARIATION ON THE Y CHROMOSOME, AUTOSOMES, AND MITOCHONDRIAL DNA

(2011) Glenn Yannic et al.   EVOLUTION

HYBRIDIZATION AND BARRIERS TO GENE FLOW IN AN ISLAND BIRD RADIATION

(2011) Ben H. Warren et al.   EVOLUTION

Discordant patterns of geographic variation between mitochondrial and microsatellite markers in the Mexican black iguana (Ctenosaura pectinata) in a contact zone

(2011) Eugenia Zarza et al.   JOURNAL OF BIOGEOGRAPHY

Asymmetric and differential gene introgression at a contact zone between two highly divergent lineages of field voles (Microtus agrestis)

(2011) M. BEYSARD et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Repeated Unidirectional Introgression of Nuclear and Mitochondrial DNA Between Four Congeneric Tanganyikan Cichlids

(2011) Bruno Nevado et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genetic differentiation among populations of a Hispaniolan trunk anole that exhibit geographical variation in dewlap colour

(2011) JULIENNE NG et al.   MOLECULAR ECOLOGY

Genetic and phenotypic variation across a hybrid zone between ecologically divergent tree squirrels (Tamiasciurus)

(2011) ANDREAS S. CHAVEZ et al.   MOLECULAR ECOLOGY

Bayesian analysis of hybridization and introgression between the endangered european mink (Mustela lutreola) and the polecat (Mustela putorius)

(2011) M. T. CABRIA et al.   MOLECULAR ECOLOGY

Hybrid origin of Audubon’s warbler

(2011) ALAN BRELSFORD et al.   MOLECULAR ECOLOGY

Nuclear–mitochondrial discordance and gene flow in a recent radiation of toads

(2011) Brian E. Fontenot et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Interspecific Hybridization and Mitochondrial Introgression in Invasive Carcinus Shore Crabs

(2011) John A. Darling   PLoS One

Ancient host specificity within a single species of brood parasitic bird

(2011) C. N. Spottiswoode et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Unidirectional Hybridization and Introgression in an Avian Contact Zone: Evidence from Genetic Markers, Morphology, and Comparisons with Laboratory-Raised F1Hybrids

(2010) Paula M. den Hartog et al.   AUK

Rampant historical mitochondrial genome introgression between two species of green pond frogs, Pelophylax nigromaculatus and P. plancyi

(2010) Kui Liu et al.   BMC EVOLUTIONARY BIOLOGY

Strong reproductive barriers in a narrow hybrid zone of West-Mediterranean green toads (Bufo viridis subgroup) with Plio-Pleistocene divergence

(2010) Caroline Colliard et al.   BMC EVOLUTIONARY BIOLOGY

Introgressive hybridization between two Iberian endemic cyprinid fish: a comparison between two independent hybrid zones

(2010) M. A. ABOIM et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Examination of nuclear loci across a zone of mitochondrial introgression between Tamias ruficaudus and T. amoenus

(2010) Noah Reid et al.   JOURNAL OF MAMMALOGY

Gene flow across secondary contact zones of the Emys orbicularis complex in the Western Mediterranean and evidence for extinction and re-introduction of pond turtles on Corsica and Sardinia (Testudines: Emydidae)

(2010) Inken Pedall et al.   JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH

Molecular Evolution of Cytochrome c Oxidase Underlies High-Altitude Adaptation in the Bar-Headed Goose

(2010) G. R. Scott et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative genome scan detects host-related divergent selection in the grasshopper Hesperotettix viridis

(2010) JENNIFER L. APPLE et al.   MOLECULAR ECOLOGY

Plio-Pleistocene history of West African Sudanian savanna and the phylogeography of the Praomys daltoni complex (Rodentia): the environment/geography/genetic interplay

(2010) J. BRYJA et al.   MOLECULAR ECOLOGY

Linking the mitochondrial genotype to the organismal phenotype

(2010) J. W. O. BALLARD et al.   MOLECULAR ECOLOGY

Mechanisms of radiation in a bat group from the genus Pipistrellus inferred by phylogeography, demography and population genetics

(2010) P. HULVA et al.   MOLECULAR ECOLOGY

Congruence between nuclear and mitochondrial DNA: Combination of multiple nuclear introns resolves a well-supported phylogeny of New World orioles (Icterus)

(2010) Frode Jacobsen et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Additional data for nuclear DNA give new insights into the phylogenetic position of Sorex granarius within the Sorex araneus group

(2010) G. Yannic et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Mitochondrial introgression and replacement between yellowhammers (Emberiza citrinella) and pine buntings (Emberiza leucocephalos) (Aves: Passeriformes)

(2009) DARREN E. IRWIN et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

ASYMMETRIC VIABILITY OF RECIPROCAL-CROSS HYBRIDS BETWEEN CRESTED AND MARBLED NEWTS (TRITURUS CRISTATUSANDT. MARMORATUS)

(2009) Jan W. Arntzen et al.   EVOLUTION

MIGRATION-SELECTION BALANCE AND LOCAL ADAPTATION OF MITOCHONDRIAL HAPLOTYPES IN RUFOUS-COLLARED SPARROWS (ZONOTRICHIA CAPENSIS) ALONG AN ELEVATIONAL GRADIENT

(2009) Zachary A. Cheviron et al.   EVOLUTION

Variable extent of hybridization between invasive sika (Cervus nippon) and native red deer (C. elaphus) in a small geographical area

(2009) HELEN V. SENN et al.   MOLECULAR ECOLOGY

Morphology and nuclear markers reveal extensive mitochondrial introgressions in the Iberian Wall Lizard species complex

(2009) JULIEN P. RENOULT et al.   MOLECULAR ECOLOGY

Hybridization between mouse lemurs in an ecological transition zone in southern Madagascar

(2009) M. GLIGOR et al.   MOLECULAR ECOLOGY

Transalpine colonisation and partial phylogeographic erosion by dispersal in the common vole (Microtus arvalis)

(2009) SONJA BRAAKER et al.   MOLECULAR ECOLOGY

Looking forwards or looking backwards in avian phylogeography? A comment on Zink and Barrowclough 2008

(2009) SCOTT EDWARDS et al.   MOLECULAR ECOLOGY

Genetic, morphological, and feather isotope variation of migratory willow warblers show gradual divergence in a ring

(2009) STAFFAN BENSCH et al.   MOLECULAR ECOLOGY

Frequent mitochondrial gene introgression among high elevation Tibetan megophryid frogs revealed by conflicting gene genealogies

(2009) WEI CHEN et al.   MOLECULAR ECOLOGY

Complete mitochondrial DNA replacement in a Lake Tanganyika cichlid fish

(2009) B. NEVADO et al.   MOLECULAR ECOLOGY

Linking genotypes to phenotypes and fitness: how mechanistic biology can inform molecular ecology

(2009) ANNE C. DALZIEL et al.   MOLECULAR ECOLOGY

The genomic legacy from the extinctLepus timidusto the three hare species of Iberia: contrast between mtDNA, sex chromosomes and autosomes

(2009) J. MELO-FERREIRA et al.   MOLECULAR ECOLOGY

Marked genetic structuring and extreme dispersal limitation in the Pyrenean brook newtCalotriton asper(Amphibia: Salamandridae) revealed by genome-wide AFLP but not mtDNA

(2009) BORJA MILÁ et al.   MOLECULAR ECOLOGY

The causes of mitochondrial DNA gene tree paraphyly in birds

(2009) Bailey D. McKay et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Natural selection and phylogenetic analysis

(2009) S. V. Edwards   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolution of muscle phenotype for extreme high altitude flight in the bar-headed goose

(2009) G. R. Scott et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Gene flow and species delimitation

(2009) Rémy J. Petit et al.   TRENDS IN ECOLOGY & EVOLUTION

HALDANE'S RULE IN AN AVIAN SYSTEM: USING CLINE THEORY AND DIVERGENCE POPULATION GENETICS TO TEST FOR DIFFERENTIAL INTROGRESSION OF MITOCHONDRIAL, AUTOSOMAL, AND SEX-LINKED LOCI ACROSS THEPASSERINABUNTING HYBRID ZONE

(2008) Matthew D. Carling et al.   EVOLUTION

Multilocus phylogeography and phylogenetics using sequence-based markers

(2008) Patrícia H. Brito et al.   GENETICA

Widespread unidirectional transfer of mitochondrial DNA: a case in western Palaearctic water frogs

(2008) J. PLÖTNER et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

History repeated: recent and historical mitochondrial introgression between the current darter Etheostoma uniporum and rainbow darter Etheostoma caeruleum (Teleostei: Percidae)

(2008) J. M. Ray et al.   JOURNAL OF FISH BIOLOGY

Hybridization Dynamics between Colorado's Native Cutthroat Trout and Introduced Rainbow Trout

(2008) Jessica L. Metcalf et al.   JOURNAL OF HEREDITY

Assessing Natural Introgression in 2 Biomedical Model Species, the Rhesus Macaque (Macaca mulatta) and the Long-Tailed Macaque (Macaca fascicularis)

(2008) M. Bonhomme et al.   JOURNAL OF HEREDITY

Widespread mito-nuclear discordance with evidence for introgressive hybridization and selective sweeps inLycaeides

(2008) ZACHARIAH GOMPERT et al.   MOLECULAR ECOLOGY

Mitochondrial DNA under siege in avian phylogeography

(2008) ROBERT M. ZINK et al.   MOLECULAR ECOLOGY

A 2000 km genetic wake yields evidence for northern glacial refugia and hybrid zone movement in a pair of songbirds

(2008) M. Krosby et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

GENETIC, MORPHOLOGICAL, AND ECOLOGICAL CHARACTERIZATION OF A HYBRID ZONE THAT SPANS A MIGRATORY DIVIDE

(2007) Kristen Ruegg   EVOLUTION

Genetic population structure and introgression in Anopheles dirus mosquitoes in South-east Asia

(2003) Catherine Walton et al.   MOLECULAR ECOLOGY