Cellulose-Enriched Microbial Communities from Leaf-Cutter Ant (Atta colombica) Refuse Dumps Vary in Taxonomic Composition and Degradation Ability

Soil-Borne Microbiome: Linking Diversity to Function

(2015) Lucas W. Mendes et al.   MICROBIAL ECOLOGY

Cellulolytic Streptomyces Strains Associated with Herbivorous Insects Share a Phylogenetically Linked Capacity To Degrade Lignocellulose

(2014) Adam J. Book et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Asticcacaulis endophyticus sp. nov., a prosthecate bacterium isolated from the root of Geum aleppicum

(2014) L. Zhu et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Complementary symbiont contributions to plant decomposition in a fungus-farming termite

(2014) Michael Poulsen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Community dynamics of cellulose-adapted thermophilic bacterial consortia

(2013) Stephanie A. Eichorst et al.   ENVIRONMENTAL MICROBIOLOGY

Minimization of chloroplast contamination in 16S rRNA gene pyrosequencing of insect herbivore bacterial communities

(2013) Alissa S. Hanshew et al.   JOURNAL OF MICROBIOLOGICAL METHODS

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ribosomal Database Project: data and tools for high throughput rRNA analysis

(2013) James R. Cole et al.   NUCLEIC ACIDS RESEARCH

Revealing Nature's Cellulase Diversity: The Digestion Mechanism of Caldicellulosiruptor bescii CelA

(2013) R. Brunecky et al.   SCIENCE

Aerobic deconstruction of cellulosic biomass by an insect-associated Streptomyces

(2013) Taichi E. Takasuka et al.   Scientific Reports

Bacterial genomes: what they teach us about cellulose degradation

(2013) Phillip J Brumm   Biofuels-UK

Phylogenetic Distribution of Potential Cellulases in Bacteria

(2012) Renaud Berlemont et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens

(2012) Frank O Aylward et al.   ISME Journal

Anaerobic Decomposition of Switchgrass by Tropical Soil-Derived Feedstock-Adapted Consortia

(2012) K. M. DeAngelis et al.   mBio

Glycoside Hydrolase Activities of Thermophilic Bacterial Consortia Adapted to Switchgrass

(2011) John M. Gladden et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Functional diversity of terrestrial microbial decomposers and their substrates

(2011) Stephan Hättenschwiler et al.   COMPTES RENDUS BIOLOGIES

Microbial diversity of cellulose hydrolysis

(2011) David B Wilson   CURRENT OPINION IN MICROBIOLOGY

Cohnella cellulosilytica sp. nov., isolated from buffalo faeces

(2011) S. Khianngam et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen

(2011) M. Hess et al.   SCIENCE

Global Gene Expression Patterns inClostridium thermocellumas Determined by Microarray Analysis of Chemostat Cultures on Cellulose or Cellobiose

(2010) Allison Riederer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Strategies for Enhancing the Effectiveness of Metagenomic-based Enzyme Discovery in Lignocellulolytic Microbial Communities

(2010) Kristen M. DeAngelis et al.   BioEnergy Research

CD-HIT Suite: a web server for clustering and comparing biological sequences

(2010) Ying Huang et al.   BIOINFORMATICS

Soil biodiversity and carbon cycling: a review and synthesis of studies examining diversity-function relationships

(2010) U. N. Nielsen et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Acidovorax soli sp. nov., isolated from landfill soil

(2010) J.-H. Choi et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Microbial Community Structure of Leaf-Cutter Ant Fungus Gardens and Refuse Dumps

(2010) Jarrod J. Scott et al.   PLoS One

Targeted Discovery of Glycoside Hydrolases from a Switchgrass-Adapted Compost Community

(2010) Martin Allgaier et al.   PLoS One

Adaptation to herbivory by the Tammar wallaby includes bacterial and glycoside hydrolase profiles different from other herbivores

(2010) P. B. Pope et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An Insect Herbivore Microbiome with High Plant Biomass-Degrading Capacity

(2010) Garret Suen et al.   PLoS Genetics

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Dyella soli sp. nov. and Dyella terrae sp. nov., isolated from soil

(2009) H.-Y. Weon et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

(2009) Micah Hamady et al.   ISME Journal

Changes in land use alter the structure of bacterial communities in Western Amazon soils

(2009) Ederson da C Jesus et al.   ISME Journal

Temporal patterns of nutrient availability around nests of leaf-cutting ants (Atta colombica) in secondary moist tropical forest

(2009) Theresa M. Hudson et al.   SOIL BIOLOGY & BIOCHEMISTRY

Do herbivores exert top-down effects in Neotropical savannas? Estimates of biomass consumption by leaf-cutter ants

(2008) Alan N. Costa et al.   JOURNAL OF VEGETATION SCIENCE

Characterization of a novel thermophilic, cellulose-degrading bacterium Paenibacillus sp. strain B39

(2008) C.-M. Wang et al.   LETTERS IN APPLIED MICROBIOLOGY

Network Relationships of Bacteria in a Stable Mixed Culture

(2008) Souichiro Kato et al.   MICROBIAL ECOLOGY

Genomics of cellulosic biofuels

(2008) Edward M. Rubin   NATURE

Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)

(2008) Diego Martinez et al.   NATURE BIOTECHNOLOGY

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

Cell-wall carbohydrates and their modification as a resource for biofuels

(2008) Markus Pauly et al.   PLANT JOURNAL