Genome and Phenotype Microarray Analyses of Rhodococcus sp. BCP1 and Rhodococcus opacus R7: Genetic Determinants and Metabolic Abilities with Environmental Relevance

The detection and phylogenetic analysis of the alkane 1-monooxygenase gene of members of the genus Rhodococcus

(2015) András Táncsics et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Growth of Rhodococcus sp. strain BCP1 on gaseous n-alkanes: new metabolic insights and transcriptional analysis of two soluble di-iron monooxygenase genes

(2015) Martina Cappelletti et al.   Frontiers in Microbiology

Biodegradation of variable-chain-length n-alkanes in Rhodococcus opacus R7 and the involvement of an alkane hydroxylase system in the metabolism

(2014) Jessica Zampolli et al.   AMB Express

DuctApe: A suite for the analysis and correlation of genomic and OmniLog™ Phenotype Microarray data

(2013) Marco Galardini et al.   GENOMICS

Data, information, knowledge and principle: back to metabolism in KEGG

(2013) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

High Throughput Phenotypic Analysis of Mycobacterium tuberculosis and Mycobacterium bovis Strains' Metabolism Using Biolog Phenotype Microarrays

(2013) Bhagwati Khatri et al.   PLoS One

Microbial degradation of chloroform

(2012) M. Cappelletti et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Regulatory network operations in the Pathway Tools software

(2012) Suzanne M Paley et al.   BMC BIOINFORMATICS

Hydrocarbon-Degrading Bacteria and the Bacterial Community Response in Gulf of Mexico Beach Sands Impacted by the Deepwater Horizon Oil Spill

(2011) Joel E. Kostka et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genomic analysis of the potential for aromatic compounds biodegradation in Burkholderiales

(2011) Danilo Pérez-Pantoja et al.   ENVIRONMENTAL MICROBIOLOGY

Adaptive seeds tame genomic sequence comparison

(2011) S. M. Kielbasa et al.   GENOME RESEARCH

Novel biodegradation pathways of cyclohexane by Rhodococcus sp. EC1

(2011) Taewoo Yi et al.   JOURNAL OF HAZARDOUS MATERIALS

Core Gene Set As the Basis of Multilocus Sequence Analysis of the Subclass Actinobacteridae

(2011) Toïdi Adékambi et al.   PLoS One

Comparative and Functional Genomics of Rhodococcus opacus PD630 for Biofuels Development

(2011) Jason W. Holder et al.   PLoS Genetics

Analyses of both thealkBGene Transcriptional Start Site andalkBPromoter-Inducing Properties ofRhodococcussp. Strain BCP1 Grown onn-Alkanes

(2010) M. Cappelletti et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification and characterization of genes involved in naphthalene degradation in Rhodococcus opacus R7

(2010) Patrizia Di Gennaro et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Benzylic and aryl hydroxylations of m-xylene by o-xylene dioxygenase from Rhodococcus sp. strain DK17

(2010) Dockyu Kim et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

The Genome of a Pathogenic Rhodococcus: Cooptive Virulence Underpinned by Key Gene Acquisitions

(2010) Michal Letek et al.   PLoS Genetics

Metabolic Capacity of Sinorhizobium (Ensifer) meliloti Strains as Determined by Phenotype MicroArray Analysis

(2009) E. G. Biondi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biological Resource Centers and Systems Biology

(2009) Yufeng Wang et al.   BIOSCIENCE

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Biodegradation potential of the genus Rhodococcus

(2008) L MARTINKOVA et al.   ENVIRONMENT INTERNATIONAL

Expression of Rhodococcus opacus alkB genes in anhydrous organic solvents

(2008) Yuka Sameshima et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Characterization of Chromate-Resistant and -Reducing Bacteria by Traditional Means and by a High-Throughput Phenomic Technique for Bioremediation Purposes

(2007) Carlo Viti et al.   BIOTECHNOLOGY PROGRESS