Community Phylogenetics: Assessing Tree Reconstruction Methods and the Utility of DNA Barcodes

The assembly of tropical tree communities - the advances and shortcomings of phylogenetic and functional trait analyses

(2013) Nathan G. Swenson   ECOGRAPHY

DNA barcoding facilitates associations and diagnoses for Trichoptera larvae of the Churchill (Manitoba, Canada) area

(2013) David E Ruiter et al.   BMC ECOLOGY

Sensitivity of Metrics of Phylogenetic Structure to Scale, Source of Data and Species Pool of Hummingbird Assemblages along Elevational Gradients

(2012) Sebastián González-Caro et al.   PLoS One

The Effect of Geographical Scale of Sampling on DNA Barcoding

(2012) J. Bergsten et al.   SYSTEMATIC BIOLOGY

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

How to measure and test phylogenetic signal

(2012) Tamara Münkemüller et al.   Methods in Ecology and Evolution

The performance of the Congruence Among Distance Matrices (CADM) test in phylogenetic analysis

(2011) Véronique Campbell et al.   BMC EVOLUTIONARY BIOLOGY

What is the phylogenetic signal limit from mitogenomes? The reconciliation between mitochondrial and nuclear data in the Insecta class phylogeny

(2011) Gerard Talavera et al.   BMC EVOLUTIONARY BIOLOGY

Global pattern and local variation in species-area relationships

(2011) Péter Sólymos et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Exploring Tree-Habitat Associations in a Chinese Subtropical Forest Plot Using a Molecular Phylogeny Generated from DNA Barcode Loci

(2011) Nancai Pei et al.   PLoS One

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Opposing effects of competitive exclusion on the phylogenetic structure of communities

(2010) Margaret M. Mayfield et al.   ECOLOGY LETTERS

The effect of environmental diversification on species diversification in New Caledonian caddisflies (Insecta: Trichoptera: Hydropsychidae)

(2010) Marianne Espeland et al.   JOURNAL OF BIOGEOGRAPHY

Ephemeroptera, Plecoptera, and Trichoptera fauna of Churchill (Manitoba, Canada): insights into biodiversity patterns from DNA barcoding

(2010) Xin Zhou et al.   JOURNAL OF THE NORTH AMERICAN BENTHOLOGICAL SOCIETY

Assessing the Value of DNA Barcodes and Other Priority Gene Regions for Molecular Phylogenetics of Lepidoptera

(2010) John James Wilson   PLoS One

9-Genes Reinforce the Phylogeny of Holometabola and Yield Alternate Views on the Phylogenetic Placement of Strepsiptera

(2010) Duane D. McKenna et al.   PLoS One

Disentangling niche and neutral influences on community assembly: assessing the performance of community phylogenetic structure tests

(2009) Steven W. Kembel   ECOLOGY LETTERS

Towards a comprehensive barcode library for arctic life - Ephemeroptera, Plecoptera, and Trichoptera of Churchill, Manitoba, Canada

(2009) Xin Zhou et al.   Frontiers in Zoology

Testing the monophyly of Calocidae (Insecta: Trichoptera) based on multiple molecular data

(2009) Kjell Arne Johanson et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogenetic Resolution and Quantifying the Phylogenetic Diversity and Dispersion of Communities

(2009) Nathan G. Swenson   PLoS One

Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama

(2009) W. J. Kress et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Testing the spatial phylogenetic structure of local communities: statistical performances of different null models and test statistics on a locally neutral community

(2008) Olivier J. Hardy   JOURNAL OF ECOLOGY

Hydraulic habitat use with respect to body size of aquatic insect larvae: Case of six species from a French Mediterranean type stream

(2007) Pierre Sagnes et al.   LIMNOLOGICA