Phylogenomic Analyses of Echinodermata Support the Sister Groups of Asterozoa and Echinozoa

Phylogenomic Resolution of the Hemichordate and Echinoderm Clade

(2014) Johanna T. Cannon et al.   CURRENT BIOLOGY

Developmental gene regulatory network evolution: Insights from comparative studies in echinoderms

(2014) Veronica F. Hinman et al.   GENESIS

Phylogenomic analysis of echinoderm class relationships supports Asterozoa

(2014) M. J. Telford et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Agalma: an automated phylogenomics workflow

(2013) Casey W Dunn et al.   BMC BIOINFORMATICS

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Probabilistic error correction for RNA sequencing

(2013) Hai-Son Le et al.   NUCLEIC ACIDS RESEARCH

The oldest echinoderm faunas from Gondwana show that echinoderm body plan diversification was rapid

(2013) Andrew B. Smith et al.   Nature Communications

Transcriptome pyrosequencing of the Antarctic brittle star Ophionotus victoriae

(2012) Gavin Burns et al.   Marine Genomics

The impact of mitochondrial genome analyses on the understanding of deuterostome phylogeny

(2012) Marleen Perseke et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Sequencing and analysis of the gastrula transcriptome of the brittle star Ophiocoma wendtii

(2012) Roy Vaughn et al.   EvoDevo

Chronology of early Cambrian biomineralization

(2011) ARTEM KOUCHINSKY et al.   GEOLOGICAL MAGAZINE

Resolving phylogenetic signal from noise when divergence is rapid: A new look at the old problem of echinoderm class relationships

(2011) Davide Pisani et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Resolving the evolutionary relationships of molluscs with phylogenomic tools

(2011) Stephen A. Smith et al.   NATURE

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Echinoderm Phylogeny Including Xyloplax, a Progenetic Asteroid

(2011) Daniel A. Janies et al.   SYSTEMATIC BIOLOGY

Evolutionary History of Regeneration in Crinoids (Echinodermata)

(2010) F. J. Gahn et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Mitochondrial genome evolution in Ophiuroidea, Echinoidea, and Holothuroidea: Insights in phylogenetic relationships of Echinodermata

(2010) Marleen Perseke et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Use of Sea Stars to Study Basic Reproductive Processes

(2010) Gary M. Wessel et al.   Systems Biology in Reproductive Medicine

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

(2009) Nicolas Lartillot et al.   BIOINFORMATICS

Assessing the root of bilaterian animals with scalable phylogenomic methods

(2009) A. Hejnol et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Broad phylogenomic sampling improves resolution of the animal tree of life

(2008) Casey W. Dunn et al.   NATURE