Resolving the evolutionary relationships of molluscs with phylogenomic tools

The maternal and early embryonic transcriptome of the milkweed bug Oncopeltus fasciatus

(2011) Ben Ewen-Campen et al.   BMC GENOMICS

Improving the quality of protein similarity network clustering algorithms using the network edge weight distribution

(2010) Leonard Apeltsin et al.   BIOINFORMATICS

A phylogeny of Vetigastropoda and other “archaeogastropods”: re-organizing old gastropod clades

(2010) Stephanie W. Aktipis et al.   INVERTEBRATE BIOLOGY

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

(2009) Nicolas Lartillot et al.   BIOINFORMATICS

Field collection of Laevipilina hyalina McLean, 1979 from southern California, the most accessible living monoplacophoran

(2009) N. G. Wilson et al.   JOURNAL OF MOLLUSCAN STUDIES

Assessing the molluscan hypothesis Serialia (Monoplacophora+Polyplacophora) using novel molecular data

(2009) Nerida G. Wilson et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Assessing the root of bilaterian animals with scalable phylogenomic methods

(2009) A. Hejnol et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Recent developments in the MAFFT multiple sequence alignment program

(2008) K. Katoh et al.   BRIEFINGS IN BIOINFORMATICS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION

Broad phylogenomic sampling improves resolution of the animal tree of life

(2008) Casey W. Dunn et al.   NATURE