De Novo Assembly of the Japanese Flounder (Paralichthys olivaceus) Spleen Transcriptome to Identify Putative Genes Involved in Immunity
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
De Novo Assembly of the Japanese Flounder (Paralichthys olivaceus) Spleen Transcriptome to Identify Putative Genes Involved in Immunity
Authors
Keywords
Transcriptome analysis, Sequence databases, Immune receptor signaling, Sequence assembly tools, Sequence motif analysis, Expressed sequence tags, Toll-like receptors, Zebrafish
Journal
PLoS One
Volume 10, Issue 2, Pages e0117642
Publisher
Public Library of Science (PLoS)
Online
2015-02-28
DOI
10.1371/journal.pone.0117642
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Molecular cloning and characterization of interferon regulatory factor 9 (IRF9) in Japanese flounder, Paralichthys olivaceus
- (2014) Guo-Bin Hu et al. FISH & SHELLFISH IMMUNOLOGY
- Molecular Characterization and Expression Analysis of ATP-Gated P2X7 Receptor Involved in Japanese Flounder (Paralichthys olivaceus) Innate Immune Response
- (2014) Shuo Li et al. PLoS One
- The coagulation system and its function in early immune defense
- (2014) Tom van der Poll et al. THROMBOSIS AND HAEMOSTASIS
- De Novo Assembly of Mud Loach (Misgurnus anguillicaudatus) Skin Transcriptome to Identify Putative Genes Involved in Immunity and Epidermal Mucus Secretion
- (2013) Yong Long et al. PLoS One
- Transcriptome Analysis of Crucian Carp (Carassius auratus), an Important Aquaculture and Hypoxia-Tolerant Species
- (2013) Xiaolin Liao et al. PLoS One
- De novo Assembly of the Indo-Pacific Humpback Dolphin Leucocyte Transcriptome to Identify Putative Genes Involved in the Aquatic Adaptation and Immune Response
- (2013) Duan Gui et al. PLoS One
- RNA-seq liver transcriptome analysis reveals an activated MHC-I pathway and an inhibited MHC-II pathway at the early stage of vaccine immunization in zebrafish
- (2012) Dahai Yang et al. BMC GENOMICS
- Identification, characterization and the interaction of Tollip and IRAK-1 in grass carp (Ctenopharyngodon idellus)
- (2012) Rong Huang et al. FISH & SHELLFISH IMMUNOLOGY
- High-Throughput Sequence Analysis of Turbot (Scophthalmus maximus) Transcriptome Using 454-Pyrosequencing for the Discovery of Antiviral Immune Genes
- (2012) Patricia Pereiro et al. PLoS One
- Toll-like receptors in bony fish: From genomics to function
- (2011) Yniv Palti DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Transcriptome and expression profiling analysis revealed changes of multiple signaling pathways involved in immunity in the large yellow croaker during Aeromonas hydrophila infection
- (2010) Yinnan Mu et al. BMC GENOMICS
- Deep sequencing-based transcriptome profiling analysis of bacteria-challenged Lateolabrax japonicus reveals insight into the immune-relevant genes in marine fish
- (2010) Li-xin Xiang et al. BMC GENOMICS
- MHC class IIα gene polymorphism and its association with resistance/susceptibility to Vibrio anguillarum in Japanese flounder (Paralichthys olivaceus)
- (2010) Tian-jun Xu et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Characterization and antiviral function of a cytosolic sensor gene, MDA5, in Japanese flounder, Paralichthys olivaceus
- (2010) Maki Ohtani et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Cloning, characterization, and expression pattern of Atlantic halibut (Hippoglossus hippoglossus L.) CD4-2, Lck, and ZAP-70
- (2010) Aina-Cathrine Øvergård et al. FISH & SHELLFISH IMMUNOLOGY
- Pathological Study on the Scuticociliatosis Affecting Farmed Japanese Flounder (Paralichthys olivaceus) in Japan
- (2010) Eman Moustafa Moustafa MOUSTAFA et al. JOURNAL OF VETERINARY MEDICAL SCIENCE
- T Cell Activation
- (2009) Jennifer E. Smith-Garvin et al. Annual Review of Immunology
- B Cell Signaling and Fate Decision
- (2009) Tomohiro Kurosaki et al. Annual Review of Immunology
- Cloning of IRAK1 and its upregulation in symptomatic mandarin fish infected with ISKNV
- (2009) Chao-Zheng Zhang et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Toll-like receptor signaling in bony fish
- (2009) Alexander Rebl et al. VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY
- Extensive expansion and diversification of the chemokine gene family in zebrafish: Identification of a novel chemokine subfamily CX
- (2008) Hisayuki Nomiyama et al. BMC GENOMICS
- Tollip, a negative regulator of TLR-signalling, is encoded by twin genes in salmonid fish
- (2008) Alexander Rebl et al. FISH & SHELLFISH IMMUNOLOGY
- Analyzing real-time PCR data by the comparative CT method
- (2008) Thomas D Schmittgen et al. Nature Protocols
- IRAK1: A critical signaling mediator of innate immunity
- (2007) Sridevi Gottipati et al. CELLULAR SIGNALLING
- Cytokines and anti-cytokines as therapeutics — An update
- (2007) Vandana Tayal et al. EUROPEAN JOURNAL OF PHARMACOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More