Comparative Transcriptome Analysis of Genes Involved in Anthocyanin Biosynthesis in the Red and Yellow Fruits of Sweet Cherry (Prunus avium L.)

Nitrogen supply affects anthocyanin biosynthetic and regulatory genes in grapevine cv. Cabernet-Sauvignon berries

(2014) Eric Soubeyrand et al.   PHYTOCHEMISTRY

A Role for PacMYBA in ABA-Regulated Anthocyanin Biosynthesis in Red-Colored Sweet Cherry cv. Hong Deng (Prunus avium L.)

(2014) Xinjie Shen et al.   PLANT AND CELL PHYSIOLOGY

A Conserved Network of Transcriptional Activators and Repressors Regulates Anthocyanin Pigmentation in Eudicots

(2014) Nick W. Albert et al.   PLANT CELL

De-novo RNA Sequencing and Metabolite Profiling to Identify Genes Involved in Anthocyanin Biosynthesis in Korean Black Raspberry (Rubus coreanus Miquel)

(2014) Tae Kyung Hyun et al.   PLoS One

Arabidopsis CAPRICE (MYB) and GLABRA3 (bHLH) Control Tomato (Solanum lycopersicum) Anthocyanin Biosynthesis

(2014) Takuji Wada et al.   PLoS One

Transcriptional dynamics of the developing sweet cherry (Prunus avium L.) fruit: sequencing, annotation and expression profiling of exocarp-associated genes

(2014) Merianne Alkio et al.   Horticulture Research

Transcriptional regulation of flavonoid biosynthesis in nectarine (Prunus persica) by a set of R2R3 MYB transcription factors

(2013) Daniela Ravaglia et al.   BMC PLANT BIOLOGY

Expression Analysis of Anthocyanin Biosynthetic Genes in Different Colored Sweet Cherries (Prunus avium L.) During Fruit Development

(2013) Yun Liu et al.   JOURNAL OF PLANT GROWTH REGULATION

Fruit Coloration and Anthocyanin Biosynthesis after Bag Removal in Non-Red and Red Apples (Malus × domestica Borkh.)

(2013) Yulian Liu et al.   MOLECULES

The flavonoid biosynthetic pathway in Arabidopsis: Structural and genetic diversity

(2013) Kazuki Saito et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Phenylpropanoid metabolites and expression of key genes involved in anthocyanin biosynthesis in the shaded peel of apple fruit in response to sun exposure

(2013) Fengjuan Feng et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

New insights into the regulation of anthocyanin biosynthesis in fruits

(2013) Laura Jaakola   TRENDS IN PLANT SCIENCE

Transcriptomic analysis of Chinese bayberry (Myrica rubra) fruit development and ripening using RNA-Seq

(2012) Chao Feng et al.   BMC GENOMICS

Fruit quality and bioactive compounds relevant to human health of sweet cherry (Prunus avium L.) cultivars grown in Italy

(2012) Gabriele Ballistreri et al.   FOOD CHEMISTRY

De novo sequencing and comparative analysis of the blueberry transcriptome to discover putative genes related to antioxidants

(2012) Xiaoyan Li et al.   GENE

The UDP glucose: flavonoid-3-O-glucosyltransferase (UFGT) gene regulates anthocyanin biosynthesis in litchi (Litchi chinesis Sonn.) during fruit coloration

(2012) Zhi Chang Zhao et al.   MOLECULAR BIOLOGY REPORTS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Transcriptional analysis of late ripening stages of grapevine berry

(2011) Sabine Guillaumie et al.   BMC PLANT BIOLOGY

Apple skin patterning is associated with differential expression of MYB10

(2011) Adriana Telias et al.   BMC PLANT BIOLOGY

Comparative analysis of total phenolic content, antioxidant activity, and flavonoids profile of fruits from two varieties of Brazilian cherry (Eugenia uniflora L.) throughout the fruit developmental stages

(2011) Giovana Bonat Celli et al.   FOOD RESEARCH INTERNATIONAL

Expression analysis in response to low temperature stress in blood oranges: Implication of the flavonoid biosynthetic pathway

(2011) Tiziana Crifò et al.   GENE

Evaluation of chemical constituents and antioxidant activity of sweet cherry (Prunus avium L.) cultivars

(2011) Hasim Kelebek et al.   INTERNATIONAL JOURNAL OF FOOD SCIENCE AND TECHNOLOGY

Comparative Study of Phenolic Compounds and Antioxidant Activity in Different Species of Cherries

(2011) Yun Liu et al.   JOURNAL OF FOOD SCIENCE

Exploring the Transcriptome Landscape of Pomegranate Fruit Peel for Natural Product Biosynthetic Gene and SSR Marker DiscoveryF

(2011) Nadia Nicole Ono et al.   Journal of Integrative Plant Biology

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

De novo sequencing and analysis of the American ginseng root transcriptome using a GS FLX Titanium platform to discover putative genes involved in ginsenoside biosynthesis

(2010) Chao Sun et al.   BMC GENOMICS

An R2R3 MYB transcription factor associated with regulation of the anthocyanin biosynthetic pathway in Rosaceae

(2010) Kui Lin-Wang et al.   BMC PLANT BIOLOGY

Optimization of de novo transcriptome assembly from next-generation sequencing data

(2010) Y. Surget-Groba et al.   GENOME RESEARCH

The Basic Helix-Loop-Helix Transcription Factor MYC1 Is Involved in the Regulation of the Flavonoid Biosynthesis Pathway in Grapevine

(2010) Imène Hichri et al.   Molecular Plant

Isolation of WDR and bHLH genes related to flavonoid synthesis in grapevine (Vitis vinifera L.)

(2010) J. T. Matus et al.   PLANT MOLECULAR BIOLOGY

Coordinated regulation of anthocyanin biosynthesis in Chinese bayberry (Myrica rubra) fruit by a R2R3 MYB transcription factor

(2010) Shan-Shan Niu et al.   PLANTA

Anthocyanin biosynthesis in pears is regulated by a R2R3-MYB transcription factor PyMYB10

(2010) Shouqian Feng et al.   PLANTA

QTL analysis and candidate gene mapping for skin and flesh color in sweet cherry fruit (Prunus avium L.)

(2010) Suneth S. Sooriyapathirana et al.   Tree Genetics & Genomes

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

Sweet cherry phytochemicals: Identification and characterization by HPLC-DAD/ESI-MS in six sweet-cherry cultivars grown in Valle del Jerte (Spain)

(2009) David González-Gómez et al.   JOURNAL OF FOOD COMPOSITION AND ANALYSIS

Developmental, genetic and environmental factors affect the expression of flavonoid genes, enzymes and metabolites in strawberry fruits

(2009) FABRIZIO CARBONE et al.   PLANT CELL AND ENVIRONMENT

Differential gene expression profiles of red and green forms of Perilla frutescens leading to comprehensive identification of anthocyanin biosynthetic genes

(2008) Mami Yamazaki et al.   FEBS Journal

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

Redirection of Flavonoid Biosynthesis through the Down-Regulation of an Anthocyanidin Glucosyltransferase in Ripening Strawberry Fruit

(2008) M. Griesser et al.   PLANT PHYSIOLOGY

Sugars, organic acids, phenolic composition and antioxidant activity of sweet cherry (Prunus avium L.)

(2007) Valentina Usenik et al.   FOOD CHEMISTRY