Prediction of Interactions between Viral and Host Proteins Using Supervised Machine Learning Methods

Reconstituting protein interaction networks using parameter-dependent domain-domain interactions

(2013) Vesna Memišević et al.   BMC BIOINFORMATICS

A matrix based algorithm for protein–protein interaction prediction using domain–domain associations

(2013) S. Binny Priya et al.   JOURNAL OF THEORETICAL BIOLOGY

Prediction of protein-protein interactions between viruses and human by an SVM model

(2012) Guangyu Cui et al.   BMC BIOINFORMATICS

The Methionine-aromatic Motif Plays a Unique Role in Stabilizing Protein Structure

(2012) Christopher C. Valley et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Computational analysis of interactomes: Current and future perspectives for bioinformatics approaches to model the host–pathogen interaction space

(2012) Roland Arnold et al.   METHODS

Update on activities at the Universal Protein Resource (UniProt) in 2013

(2012)   NUCLEIC ACIDS RESEARCH

PROGRESS IN COMPUTATIONAL STUDIES OF HOST–PATHOGEN INTERACTIONS

(2012) HUFENG ZHOU et al.   Journal of Bioinformatics and Computational Biology

ESpritz: accurate and fast prediction of protein disorder

(2011) Ian Walsh et al.   BIOINFORMATICS

Conditional random field approach to prediction of protein-protein interactions using domain information

(2011) Morihiro Hayashida et al.   BMC Systems Biology

Supervised learning and prediction of physical interactions between human and HIV proteins

(2011) Matthew D. Dyer et al.   INFECTION GENETICS AND EVOLUTION

Mapping Protein Interactions between Dengue Virus and Its Human and Insect Hosts

(2011) Janet M. Doolittle et al.   PLoS Neglected Tropical Diseases

Semi-supervised multi-task learning for predicting interactions between HIV-1 and human proteins

(2010) Y. Qi et al.   BIOINFORMATICS

Cytoscape 2.8: new features for data integration and network visualization

(2010) M. E. Smoot et al.   BIOINFORMATICS

Exploiting Amino Acid Composition for Predicting Protein-Protein Interactions

(2009) Sushmita Roy et al.   PLoS One

Using support vector machine combined with auto covariance to predict protein–protein interactions from protein sequences

(2008) Yanzhi Guo et al.   NUCLEIC ACIDS RESEARCH

VirusMINT: a viral protein interaction database

(2008) A. Chatr-aryamontri et al.   NUCLEIC ACIDS RESEARCH

An overview of molecular epidemiology of hepatitis B virus (HBV) in India

(2008) Sibnarayan Datta   Virology Journal