Molecular Characterization of an Intact p53 Pathway Subtype in High-Grade Serous Ovarian Cancer

Human RecQ Helicases in DNA Repair, Recombination, and Replication

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Functional genomics identifyBirc5/Survivinas a candidate gene involved in the chronotoxicity of cyclin-dependent kinase inhibitors

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The spindle and kinetochore–associated (Ska) complex enhances binding of the anaphase-promoting complex/cyclosome (APC/C) to chromosomes and promotes mitotic exit

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NEK9 depletion induces catastrophic mitosis by impairment of mitotic checkpoint control and spindle dynamics

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DNA damage associated with mitosis and cytokinesis failure

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Overexpression of CDCA2 in Human Squamous Cell Carcinoma: Correlation with Prevention of G1 Phase Arrest and Apoptosis

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Nek1 kinase associates with ATR-ATRIP and primes ATR for efficient DNA damage signaling

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Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

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High-Risk Ovarian Cancer Based on 126-Gene Expression Signature Is Uniquely Characterized by Downregulation of Antigen Presentation Pathway

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VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing

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Functional impact bias reveals cancer drivers

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Genomic Profiles Specific to Patient Ethnicity in Lung Adenocarcinoma

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Quantitative Chemical Proteomics Reveals New Potential Drug Targets in Head and Neck Cancer

(2011) Zhixiang Wu et al.   MOLECULAR & CELLULAR PROTEOMICS

Integrated genomic analyses of ovarian carcinoma

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A framework for variation discovery and genotyping using next-generation DNA sequencing data

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Predicting the functional impact of protein mutations: application to cancer genomics

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Gitools: Analysis and Visualisation of Genomic Data Using Interactive Heat-Maps

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The Origin and Pathogenesis of Epithelial Ovarian Cancer: A Proposed Unifying Theory

(2010) Robert J. Kurman et al.   AMERICAN JOURNAL OF SURGICAL PATHOLOGY

Expression signatures of TP53 mutations in serous ovarian cancers

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Human ASPM participates in spindle organisation, spindle orientation and cytokinesis

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Human RecQL4 Helicase Plays Critical Roles in Prostate Carcinogenesis

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Germline copy number variations in BRCA1-associated ovarian cancer patients

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Differences in Tumor Type in Low-stage Versus High-stage Ovarian Carcinomas

(2010) Martin Köbel et al.   INTERNATIONAL JOURNAL OF GYNECOLOGICAL PATHOLOGY

Driver mutations in TP53 are ubiquitous in high grade serous carcinoma of the ovary

(2010) Ahmed Ashour Ahmed et al.   JOURNAL OF PATHOLOGY

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

(2010) K. Wang et al.   NUCLEIC ACIDS RESEARCH

Gene Expression Profile for Predicting Survival in Advanced-Stage Serous Ovarian Cancer Across Two Independent Datasets

(2010) Kosuke Yoshihara et al.   PLoS One

Allele-specific copy number analysis of tumors

(2010) P. Van Loo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Sequence Alignment/Map format and SAMtools

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Fast and accurate short read alignment with Burrows-Wheeler transform

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Modeling genetic inheritance of copy number variations

(2008) Kai Wang et al.   NUCLEIC ACIDS RESEARCH

PID: the Pathway Interaction Database

(2008) Carl F. Schaefer et al.   NUCLEIC ACIDS RESEARCH

Kinome siRNA Screen Identifies Regulators of Ciliogenesis and Hedgehog Signal Transduction

(2008) M. Evangelista et al.   Science Signaling