The Genome and Linkage Map of the Northern Pike (Esox lucius): Conserved Synteny Revealed between the Salmonid Sister Group and the Neoteleostei
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
The Genome and Linkage Map of the Northern Pike (Esox lucius): Conserved Synteny Revealed between the Salmonid Sister Group and the Neoteleostei
Authors
Keywords
-
Journal
PLoS One
Volume 9, Issue 7, Pages e102089
Publisher
Public Library of Science (PLoS)
Online
2014-07-29
DOI
10.1371/journal.pone.0102089
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Linkage maps of the Atlantic salmon (Salmo salar) genome derived from RAD sequencing
- (2014) Serap Gonen et al. BMC GENOMICS
- A well-constrained estimate for the timing of the salmonid whole genome duplication reveals major decoupling from species diversification
- (2014) D. J. Macqueen et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates
- (2014) Camille Berthelot et al. Nature Communications
- EST-based microsatellites for northern pike (Esox lucius) and cross-amplification across all Esox species
- (2014) G. Ouellet-Cauchon et al. Conservation Genetics Resources
- Non-random DNA fragmentation in next-generation sequencing
- (2014) Maria S. Poptsova et al. Scientific Reports
- Genomics of sablefish (Anoplopoma fimbria): expressed genes, mitochondrial phylogeny, linkage map and identification of a putative sex gene
- (2013) Eric B Rondeau et al. BMC GENOMICS
- Mapping the sex determination locus in the Atlantic halibut (Hippoglossus hippoglossus) using RAD sequencing
- (2013) Christos Palaiokostas et al. BMC GENOMICS
- Pike and salmon as sister taxa: Detailed intraclade resolution and divergence time estimation of Esociformes+Salmoniformes based on whole mitochondrial genome sequences
- (2013) Matthew A. Campbell et al. GENE
- Characterization of comparative genome-derived simple sequence repeats for acanthopterygian fishes
- (2013) Ryo O. Gotoh et al. Molecular Ecology Resources
- The African coelacanth genome provides insights into tetrapod evolution
- (2013) Chris T. Amemiya et al. NATURE
- The UCSC Genome Browser database: 2014 update
- (2013) Donna Karolchik et al. NUCLEIC ACIDS RESEARCH
- Insights into the Loblolly Pine Genome: Characterization of BAC and Fosmid Sequences
- (2013) Jill L. Wegrzyn et al. PLoS One
- Copy-number changes in evolution: rates, fitness effects and adaptive significance
- (2013) Vaishali Katju et al. Frontiers in Genetics
- Bio.Phylo: A unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython
- (2012) Eric Talevich et al. BMC BIOINFORMATICS
- Profiling of gene duplication patterns of sequenced teleost genomes: evidence for rapid lineage-specific genome expansion mediated by recent tandem duplications
- (2012) Jianguo Lu et al. BMC GENOMICS
- Transcriptome analysis reveals the time of the fourth round of genome duplication in common carp (Cyprinus carpio)
- (2012) Jin-Tu Wang et al. BMC GENOMICS
- Universal primers for fluorescent labelling of PCR fragments-an efficient and cost-effective approach to genotyping by fluorescence
- (2012) M. J. BLACKET et al. Molecular Ecology Resources
- The genomic basis of adaptive evolution in threespine sticklebacks
- (2012) Felicity C. Jones et al. NATURE
- RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics
- (2012) M. Lohse et al. NUCLEIC ACIDS RESEARCH
- Transcriptome Profiling of Testis during Sexual Maturation Stages in Eriocheir sinensis Using Illumina Sequencing
- (2012) Lin He et al. PLoS One
- Resolution of ray-finned fish phylogeny and timing of diversification
- (2012) T. J. Near et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects
- (2011) Carson Holt et al. BMC BIOINFORMATICS
- A dense SNP-based linkage map for Atlantic salmon (Salmo salar) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns
- (2011) Sigbjørn Lien et al. BMC GENOMICS
- Genome Evolution and Meiotic Maps by Massively Parallel DNA Sequencing: Spotted Gar, an Outgroup for the Teleost Genome Duplication
- (2011) Angel Amores et al. GENETICS
- The genome sequence of Atlantic cod reveals a unique immune system
- (2011) Bastiaan Star et al. NATURE
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Considering Transposable Element Diversification in De Novo Annotation Approaches
- (2011) Timothée Flutre et al. PLoS One
- Stacks : Building and Genotyping Loci De Novo From Short-Read Sequences
- (2011) Julian M. Catchen et al. G3-Genes Genomes Genetics
- Assessment of population structure in Pacific Lepeophtheirus salmonis (Krøyer) using single nucleotide polymorphism and microsatellite genetic markers
- (2010) Amber M. Messmer et al. AQUACULTURE
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome
- (2010) Jong S Leong et al. BMC GENOMICS
- Genetic characterization of 18 novel microsatellite loci in northern pike (Esox lucius L.)
- (2010) Jun Wang et al. GENETICS AND MOLECULAR BIOLOGY
- Phylogenetic position of the enigmatic Lepidogalaxias salamandroides with comment on the orders of lower euteleostean fishes
- (2010) Jun Li et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- High-quality draft assemblies of mammalian genomes from massively parallel sequence data
- (2010) S. Gnerre et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Biopython: freely available Python tools for computational molecular biology and bioinformatics
- (2009) P. J. A. Cock et al. BIOINFORMATICS
- Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
- (2009) Da Wei Huang et al. Nature Protocols
- The evolutionary significance of ancient genome duplications
- (2009) Yves Van de Peer et al. NATURE REVIEWS GENETICS
- A second generation genetic map for rainbow trout (Oncorhynchus mykiss)
- (2008) Caird E Rexroad et al. BMC GENETICS
- A salmonid EST genomic study: genes, duplications, phylogeny and microarrays
- (2008) Ben F Koop et al. BMC GENOMICS
- Current and future directions for pike ecology and management: a summary and synthesis
- (2008) P. Anders Nilsson et al. HYDROBIOLOGIA
- A short review of pike ecology
- (2008) J. F. Craig HYDROBIOLOGIA
- Turning a hobby into a job: How duplicated genes find new functions
- (2008) Gavin C. Conant et al. NATURE REVIEWS GENETICS
- Preferential subfunctionalization of slow-evolving genes after allopolyploidization in Xenopus laevis
- (2008) M. Semon et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More