De Novo Assembly and Transcriptome Analysis of the Rubber Tree (Hevea brasiliensis) and SNP Markers Development for Rubber Biosynthesis Pathways

De novo transcriptome analysis of Hevea brasiliensis tissues by RNA-seq and screening for molecular markers

(2014) Leonardo Salgado et al.   BMC GENOMICS

Leaf-, panel- and latex-expressed sequenced tags from the rubber tree (Hevea brasiliensis) under cold-stressed and suboptimal growing conditions: the development of gene-targeted functional markers for stress response

(2014) Carla C. Silva et al.   MOLECULAR BREEDING

Draft genome sequence of the rubber tree Hevea brasiliensis

(2013) Ahmad Yamin Abdul Rahman et al.   BMC GENOMICS

Genome-Wide SNP Genotyping to Infer the Effects on Gene Functions in Tomato

(2013) H. Hirakawa et al.   DNA RESEARCH

QTL Mapping of Growth-Related Traits in a Full-Sib Family of Rubber Tree (Hevea brasiliensis) Evaluated in a Sub-Tropical Climate

(2013) Livia Moura Souza et al.   PLoS One

Applications of next-generation sequencing in plant biology

(2012) Ashley N. Egan et al.   AMERICAN JOURNAL OF BOTANY

De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.)

(2012) Dejun Li et al.   BMC GENOMICS

Plant responses to stresses: role of ascorbate peroxidase in the antioxidant protection

(2012) Andréia Caverzan et al.   GENETICS AND MOLECULAR BIOLOGY

Structural and Functional Analysis of VQ Motif-Containing Proteins in Arabidopsis as Interacting Proteins of WRKY Transcription Factors

(2012) Y. Cheng et al.   PLANT PHYSIOLOGY

Maize (Zea mays L.) Genome Diversity as Revealed by RNA-Sequencing

(2012) Candice N. Hansey et al.   PLoS One

Genome-Wide SNP Detection, Validation, and Development of an 8K SNP Array for Apple

(2012) David Chagné et al.   PLoS One

Breakdown of Phylogenetic Signal: A Survey of Microsatellite Densities in 454 Shotgun Sequences from 154 Non Model Eukaryote Species

(2012) Emese Meglécz et al.   PLoS One

Single nucleotide polymorphism marker development in the rubber tree, Hevea brasiliensis (Euphorbiaceae)

(2011) Wirulda Pootakham et al.   AMERICAN JOURNAL OF BOTANY

De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)

(2011) Zhangying Wang et al.   BMC GENOMICS

Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers

(2011) Wenliang Wei et al.   BMC GENOMICS

Transcriptome Sequencing of Hevea brasiliensis for Development of Microsatellite Markers and Construction of a Genetic Linkage Map

(2011) K. Triwitayakorn et al.   DNA RESEARCH

Discovery and mapping of a new expressed sequence tag-single nucleotide polymorphism and simple sequence repeat panel for large-scale genetic studies and breeding of Theobroma cacao L.

(2011) M. Allegre et al.   DNA RESEARCH

Metabolic routes affecting rubber biosynthesis in Hevea brasiliensis latex

(2011) Keng-See Chow et al.   JOURNAL OF EXPERIMENTAL BOTANY

Forest tree genomics: growing resources and applications

(2011) David B. Neale et al.   NATURE REVIEWS GENETICS

Chalcone synthase and its functions in plant resistance

(2011) T. T. H. Dao et al.   PHYTOCHEMISTRY REVIEWS

RNA-Seq analysis and de novo transcriptome assembly of Hevea brasiliensis

(2011) Zhihui Xia et al.   PLANT MOLECULAR BIOLOGY

A rubber tree’s durable resistance to Microcyclus ulei is conferred by a qualitative gene and a major quantitative resistance factor

(2011) Vincent Le Guen et al.   Tree Genetics & Genomes

Function annotation of the rice transcriptome at single-nucleotide resolution by RNA-seq

(2010) T. Lu et al.   GENOME RESEARCH

Glycine-rich RNA-binding proteins are functionally conserved in Arabidopsis thaliana and Oryza sativa during cold adaptation process

(2010) Joo Yeol Kim et al.   JOURNAL OF EXPERIMENTAL BOTANY

Development and characterization of 296 new polymorphic microsatellite markers for rubber tree (Hevea brasiliensis)

(2010) V. Le Guen et al.   PLANT BREEDING

WD40 proteins propel cellular networks

(2010) Christian U. Stirnimann et al.   TRENDS IN BIOCHEMICAL SCIENCES

WRKY transcription factors

(2010) Paul J. Rushton et al.   TRENDS IN PLANT SCIENCE

Microsatellites from rubber tree (Hevea brasiliensis) for genetic diversity analysis and cross-amplification in six Hevea wild species

(2009) L. M. Souza et al.   Conservation Genetics Resources

Cloning and Characterization of the 2-C-Methyl-D-erythritol 4-Phosphate (MEP) Pathway Genes of a Natural-Rubber Producing Plant,Hevea brasiliensis

(2008) Tomoki SANDO et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis

(2008) Ryan Lister et al.   CELL

Development, characterization and cross-species/genera transferability of EST-SSR markers for rubber tree (Hevea brasiliensis)

(2008) S. P. Feng et al.   MOLECULAR BREEDING

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS