Elimination of Ligation Dependent Artifacts in T4 RNA Ligase to Achieve High Efficiency and Low Bias MicroRNA Capture

Crowders Perturb the Entropy of RNA Energy Landscapes to Favor Folding

(2013) Duncan Kilburn et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

High-efficiency RNA cloning enables accurate quantification of miRNA expression by deep sequencing

(2013) Zhaojie Zhang et al.   GENOME BIOLOGY

Structural bias in T4 RNA ligase-mediated 3′-adapter ligation

(2012) Fanglei Zhuang et al.   NUCLEIC ACIDS RESEARCH

T4 RNA Ligase 2 truncated active site mutants: improved tools for RNA analysis

(2011) Sebastien Viollet et al.   BMC BIOTECHNOLOGY

Barcoding bias in high-throughput multiplex sequencing of miRNA

(2011) S. Alon et al.   GENOME RESEARCH

Toward the blood-borne miRNome of human diseases

(2011) Andreas Keller et al.   NATURE METHODS

Identification and remediation of biases in the activity of RNA ligases in small-RNA deep sequencing

(2011) Anitha D. Jayaprakash et al.   NUCLEIC ACIDS RESEARCH

Quantitative Bias in Illumina TruSeq and a Novel Post Amplification Barcoding Strategy for Multiplexed DNA and Small RNA Deep Sequencing

(2011) Filip Van Nieuwerburgh et al.   PLoS One

RNA-ligase-dependent biases in miRNA representation in deep-sequenced small RNA cDNA libraries

(2011) M. Hafner et al.   RNA

A bias-reducing strategy in profiling small RNAs using Solexa

(2011) G. Sun et al.   RNA

Molecular Crowding Stabilizes Folded RNA Structure by the Excluded Volume Effect

(2010) Duncan Kilburn et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Targeting microRNAs in cancer: rationale, strategies and challenges

(2010) Ramiro Garzon et al.   NATURE REVIEWS DRUG DISCOVERY

Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing technologies for measuring differential microRNA expression

(2010) A. Git et al.   RNA

MicroRNAs in Cancer

(2009) Ramiro Garzon et al.   Annual Review of Medicine

Reproducibility of quantitative RT-PCR array in miRNA expression profiling and comparison with microarray analysis

(2009) Yongxin Chen et al.   BMC GENOMICS

Therapeutic microRNA Delivery Suppresses Tumorigenesis in a Murine Liver Cancer Model

(2009) Janaiah Kota et al.   CELL

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

MicroRNAs and Cancer: Short RNAs Go a Long Way

(2009) Andrea Ventura et al.   CELL

RETRACTED: A Pleiotropically Acting MicroRNA, miR-31, Inhibits Breast Cancer Metastasis

(2009) Scott Valastyan et al.   CELL

Facilitation of RNA Enzyme Activity in the Molecular Crowding Media of Cosolutes

(2009) Shu-ichi Nakano et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Limitations and possibilities of small RNA digital gene expression profiling

(2009) Sam E V Linsen et al.   NATURE METHODS

Quantitative miRNA expression analysis: Comparing microarrays with next-generation sequencing

(2009) H. Willenbrock et al.   RNA

Molecular crowding effects on structure and stability of DNA

(2008) Daisuke Miyoshi et al.   BIOCHIMIE

Measuring microRNAs: Comparisons of microarray and quantitative PCR measurements, and of different total RNA prep methods

(2008) Robert A Ach et al.   BMC BIOTECHNOLOGY

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

(2008) R. D. Morin et al.   GENOME RESEARCH

Efficient microRNA capture and bar-coding via enzymatic oligonucleotide adenylation

(2008) Francois Vigneault et al.   NATURE METHODS

MicroRNA expression profiling using microarrays

(2008) Chang-Gong Liu et al.   Nature Protocols

Highly sensitive and specific microRNA expression profiling using BeadArray technology

(2008) Jing Chen et al.   NUCLEIC ACIDS RESEARCH

Circulating microRNAs as stable blood-based markers for cancer detection

(2008) P. S. Mitchell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing

(2007) Markus Hafner et al.   METHODS