High-efficiency RNA cloning enables accurate quantification of miRNA expression by deep sequencing
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
High-efficiency RNA cloning enables accurate quantification of miRNA expression by deep sequencing
Authors
Keywords
Ligation Reaction, Seed Match, Individual miRNAs, Ligation Step, Cloning Frequency
Journal
GENOME BIOLOGY
Volume 14, Issue 10, Pages R109
Publisher
Springer Nature
Online
2013-10-08
DOI
10.1186/gb-2013-14-10-r109
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Rapid and widespread suppression of self-renewal by microRNA-203 during epidermal differentiation
- (2013) S. J. Jackson et al. DEVELOPMENT
- Natural RNA circles function as efficient microRNA sponges
- (2013) Thomas B. Hansen et al. NATURE
- Circular RNAs are a large class of animal RNAs with regulatory potency
- (2013) Sebastian Memczak et al. NATURE
- Genome-wide maps of polyadenylation reveal dynamic mRNA 3'-end formation in mammalian cell lineages
- (2013) L. Wang et al. RNA
- Structural bias in T4 RNA ligase-mediated 3′-adapter ligation
- (2012) Fanglei Zhuang et al. NUCLEIC ACIDS RESEARCH
- Ribosome Profiling Shows That miR-430 Reduces Translation Before Causing mRNA Decay in Zebrafish
- (2012) A. A. Bazzini et al. SCIENCE
- A Rapid and Scalable System for Studying Gene Function in Mice Using Conditional RNA Interference
- (2011) Prem K. Premsrirut et al. CELL
- Coding-Independent Regulation of the Tumor Suppressor PTEN by Competing Endogenous mRNAs
- (2011) Yvonne Tay et al. CELL
- A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA
- (2011) Marcella Cesana et al. CELL
- Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome
- (2011) Cailin E. Joyce et al. HUMAN MOLECULAR GENETICS
- Global quantification of mammalian gene expression control
- (2011) Björn Schwanhäusser et al. NATURE
- MicroRNAs can generate thresholds in target gene expression
- (2011) Shankar Mukherji et al. NATURE GENETICS
- Identification and remediation of biases in the activity of RNA ligases in small-RNA deep sequencing
- (2011) Anitha D. Jayaprakash et al. NUCLEIC ACIDS RESEARCH
- RNA-ligase-dependent biases in miRNA representation in deep-sequenced small RNA cDNA libraries
- (2011) M. Hafner et al. RNA
- MicroRNA-9 Coordinates Proliferation and Migration of Human Embryonic Stem Cell-Derived Neural Progenitors
- (2010) Celine Delaloy et al. Cell Stem Cell
- A dicer-independent miRNA biogenesis pathway that requires Ago catalysis
- (2010) Sihem Cheloufi et al. NATURE
- miRBase: integrating microRNA annotation and deep-sequencing data
- (2010) A. Kozomara et al. NUCLEIC ACIDS RESEARCH
- Conserved vertebrate mir-451 provides a platform for Dicer-independent, Ago2-mediated microRNA biogenesis
- (2010) J.-S. Yang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Novel miRNA Processing Pathway Independent of Dicer Requires Argonaute2 Catalytic Activity
- (2010) D. Cifuentes et al. SCIENCE
- MicroRNAs: Target Recognition and Regulatory Functions
- (2009) David P. Bartel CELL
- MicroRNAs miR-143 and miR-145 modulate cytoskeletal dynamics and responsiveness of smooth muscle cells to injury
- (2009) M. Xin et al. GENES & DEVELOPMENT
- Limitations and possibilities of small RNA digital gene expression profiling
- (2009) Sam E V Linsen et al. NATURE METHODS
- miR-124 regulates adult neurogenesis in the subventricular zone stem cell niche
- (2009) Li-Chun Cheng et al. NATURE NEUROSCIENCE
- A feedback regulatory loop involving microRNA-9 and nuclear receptor TLX in neural stem cell fate determination
- (2009) Chunnian Zhao et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Absolute quantification of microRNAs by using a universal reference
- (2009) U. Bissels et al. RNA
- The Endothelial-Specific MicroRNA miR-126 Governs Vascular Integrity and Angiogenesis
- (2008) Shusheng Wang et al. DEVELOPMENTAL CELL
- microRNA-133a regulates cardiomyocyte proliferation and suppresses smooth muscle gene expression in the heart
- (2008) N. Liu et al. GENES & DEVELOPMENT
- The impact of microRNAs on protein output
- (2008) Daehyun Baek et al. NATURE
- Widespread changes in protein synthesis induced by microRNAs
- (2008) Matthias Selbach et al. NATURE
- Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes
- (2008) Toshiaki Watanabe et al. NATURE
- Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes
- (2008) Oliver H. Tam et al. NATURE
- Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing
- (2007) Markus Hafner et al. METHODS
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started