Predicting Human Protein Subcellular Locations by the Ensemble of Multiple Predictors via Protein-Protein Interaction Network with Edge Clustering Coefficients

Determining the subcellular location of new proteins from microscope images using local features

(2013) Luis Pedro Coelho et al.   BIOINFORMATICS

Predicting multisite protein subcellular locations: progress and challenges

(2013) Pufeng Du et al.   Expert Review of Proteomics

Proteome-wide discovery of mislocated proteins in cancer

(2013) K. Lee et al.   GENOME RESEARCH

iLoc-Animal: a multi-label learning classifier for predicting subcellular localization of animal proteins

(2013) Wei-Zhong Lin et al.   Molecular BioSystems

Some remarks on predicting multi-label attributes in molecular biosystems

(2013) Kuo-Chen Chou   Molecular BioSystems

MetaLocGramN: A meta-predictor of protein subcellular localization for Gram-negative bacteria

(2012) Marcin Magnus et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Predicting multiplex subcellular localization of proteins using protein-protein interaction network: a comparative study

(2012) Jonathan Q Jiang et al.   BMC BIOINFORMATICS

Minimalist ensemble algorithms for genome-wide protein localization prediction

(2012) Jhih-Rong Lin et al.   BMC BIOINFORMATICS

Iteration method for predicting essential proteins based on orthology and protein-protein interaction networks

(2012) Wei Peng et al.   BMC Systems Biology

Update on activities at the Universal Protein Resource (UniProt) in 2013

(2012)   NUCLEIC ACIDS RESEARCH

An Ensemble Classifier for Eukaryotic Protein Subcellular Location Prediction Using Gene Ontology Categories and Amino Acid Hydrophobicity

(2012) Liqi Li et al.   PLoS One

iLoc-Gpos: A Multi-Layer Classifier for Predicting the Subcellular Localization of Singleplex and Multiplex Gram-Positive Bacterial Proteins

(2012) Zhi-Cheng Wu et al.   PROTEIN AND PEPTIDE LETTERS

Construction and application of dynamic protein interaction network based on time course gene expression data

(2012) Jianxin Wang et al.   PROTEOMICS

Recent progress in predicting protein sub-subcellular locations

(2011) Pufeng Du et al.   Expert Review of Proteomics

Identification of Essential Proteins Based on Edge Clustering Coefficient

(2011) Jianxin Wang et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

iLoc-Plant: a multi-label classifier for predicting the subcellular localization of plant proteins with both single and multiple sites

(2011) Zhi-Cheng Wu et al.   Molecular BioSystems

iLoc-Hum: using the accumulation-label scale to predict subcellular locations of human proteins with both single and multiple sites

(2011) Kuo-Chen Chou et al.   Molecular BioSystems

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

The UniProt-GO Annotation database in 2011

(2011) E. C. Dimmer et al.   NUCLEIC ACIDS RESEARCH

PROlocalizer: integrated web service for protein subcellular localization prediction

(2010) Kirsti Laurila et al.   AMINO ACIDS

Some remarks on protein attribute prediction and pseudo amino acid composition

(2010) Kuo-Chen Chou   JOURNAL OF THEORETICAL BIOLOGY

Towards a knowledge-based Human Protein Atlas

(2010) Mathias Uhlen et al.   NATURE BIOTECHNOLOGY

YLoc—an interpretable web server for predicting subcellular localization

(2010) Sebastian Briesemeister et al.   NUCLEIC ACIDS RESEARCH

Prediction of subcellular locations of proteins: Where to proceed?

(2010) Kenichiro Imai et al.   PROTEOMICS

A top-down approach to enhance the power of predicting human protein subcellular localization: Hum-mPLoc 2.0

(2009) Hong-Bin Shen et al.   ANALYTICAL BIOCHEMISTRY

Network-based prediction of metabolic enzymes' subcellular localization

(2009) S. Mintz-Oron et al.   BIOINFORMATICS

Protein-protein interaction as a predictor of subcellular location

(2009) Chang Jin Shin et al.   BMC Systems Biology

Construction of Functional Interaction Networks through Consensus Localization Predictions of the Human Proteome

(2009) Solip Park et al.   JOURNAL OF PROTEOME RESEARCH

Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms

(2008) Kuo-Chen Chou et al.   Nature Protocols

Protein networks markedly improve prediction of subcellular localization in multiple eukaryotic species

(2008) KiYoung Lee et al.   NUCLEIC ACIDS RESEARCH