Eight New Genomes and Synthetic Controls Increase the Accessibility of Rapid Melt-MAMA SNP Typing of Coxiella burnetii

When Outgroups Fail; Phylogenomics of Rooting the Emerging Pathogen, Coxiella burnetii

(2013) Talima Pearson et al.   SYSTEMATIC BIOLOGY

Molecular typing of Coxiella burnetii from animal and environmental matrices during Q fever epidemics in the Netherlands

(2012) Arnout de Bruin et al.   BMC Veterinary Research

The phylogeographic pattern ofFrancisella tularensisin Sweden indicates a Scandinavian origin of Eurosiberian tularaemia

(2012) Edvin Karlsson et al.   ENVIRONMENTAL MICROBIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity

(2012) Nicholas J. Loman et al.   NATURE REVIEWS MICROBIOLOGY

Melt Analysis of Mismatch Amplification Mutation Assays (Melt-MAMA): A Functional Study of a Cost-Effective SNP Genotyping Assay in Bacterial Models

(2012) Dawn N. Birdsell et al.   PLoS One

Coxiella burnetiiin bulk tank milk of dairy cattle in south-west England: FIG 1:

(2012) G. E. Valergakis et al.   VETERINARY RECORD

Detection of Coxiella burnetii in Complex Matrices by Using Multiplex Quantitative PCR during a Major Q Fever Outbreak in The Netherlands

(2011) A. de Bruin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Single-Nucleotide-Polymorphism Genotyping ofCoxiella burnetiiduring a Q Fever Outbreak in The Netherlands

(2011) Cornelis J. J. Huijsmans et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phylogeography of Francisella tularensis subspecies holarctica from the country of Georgia

(2011) Gvantsa Chanturia et al.   BMC MICROBIOLOGY

Genotypic Diversity of Coxiella burnetii in the 2007-2010 Q Fever Outbreak Episodes in The Netherlands

(2011) J. J. H. C. Tilburg et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Rapid Typing of Coxiella burnetii

(2011) Heidie M. Hornstra et al.   PLoS One

Phylogeography and Molecular Epidemiology of Yersinia pestis in Madagascar

(2011) Amy J. Vogler et al.   PLoS Neglected Tropical Diseases

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

Real-Time PCR with Serum Samples Is Indispensable for Early Diagnosis of Acute Q Fever

(2009) P. M. Schneeberger et al.   Clinical and Vaccine Immunology

Evaluation of randomly amplified polymorphic DNA (RAPD) for discrimination of Coxiella burnetii ruminant strains isolated in France

(2009) K. Sidi-Boumedine et al.   CLINICAL MICROBIOLOGY AND INFECTION

ABySS: A parallel assembler for short read sequence data

(2009) J. T. Simpson et al.   GENOME RESEARCH

Short communication: Investigation of Coxiella burnetii occurrence in dairy sheep flocks by bulk-tank milk analysis and antibody level determination

(2009) A.L. García-Pérez et al.   JOURNAL OF DAIRY SCIENCE

Real-time PCR for the early detection and quantification of Coxiella burnetii as an alternative to the murine bioassay

(2009) Gerald B. Howe et al.   MOLECULAR AND CELLULAR PROBES

A Real-Time PCR Array for Hierarchical Identification of Francisella Isolates

(2009) Kerstin Svensson et al.   PLoS One

Host cell-free growth of the Q fever bacterium Coxiella burnetii

(2009) A. Omsland et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Case of Person-to-Person Transmission of Q Fever from an Active Duty Serviceman to His Spouse

(2009) Marisa H. Miceli et al.   VECTOR-BORNE AND ZOONOTIC DISEASES

Q fever

(2009) Emmanouil Angelakis et al.   VETERINARY MICROBIOLOGY

Comparative Genomics Reveal Extensive Transposon-Mediated Genomic Plasticity and Diversity among Potential Effector Proteins within the Genus Coxiella

(2008) P. A. Beare et al.   INFECTION AND IMMUNITY