The Transcriptional Landscape of Campylobacter jejuni under Iron Replete and Iron Limited Growth Conditions

Comparative RNA-Seq and Microarray Analysis of Gene Expression Changes in B-Cell Lymphomas of Canis familiaris

(2013) Marie Mooney et al.   PLoS One

High-Resolution Transcriptome Maps Reveal Strain-Specific Regulatory Features of Multiple Campylobacter jejuni Isolates

(2013) Gaurav Dugar et al.   PLoS Genetics

Transcriptome analysis using next-generation sequencing

(2012) Kai-Oliver Mutz et al.   CURRENT OPINION IN BIOTECHNOLOGY

RNA-Seq vs Dual- and Single-Channel Microarray Data: Sensitivity Analysis for Differential Expression and Clustering

(2012) Alina Sîrbu et al.   PLoS One

Structure and regulon of Campylobacter jejuni ferric uptake regulator Fur define apo-Fur regulation

(2012) J. Butcher et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Re-sequencing of a virulent strain of Campylobacter jejuni NCTC11168 reveals potential virulence factors

(2012) Kerry K. Cooper et al.   RESEARCH IN MICROBIOLOGY

Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental data

(2011) T. Carver et al.   BIOINFORMATICS

Campylobacter jejuni dsb gene expression is regulated by iron in a Fur-dependent manner and by a translational coupling mechanism

(2011) Anna D Grabowska et al.   BMC MICROBIOLOGY

Quantitative RNA-seq analysis of the Campylobacter jejuni transcriptome

(2011) R. R. Chaudhuri et al.   MICROBIOLOGY-SGM

Standing Genetic Variation in Contingency Loci Drives the Rapid Adaptation of Campylobacter jejuni to a Novel Host

(2011) John P. Jerome et al.   PLoS One

A Role for the RNA Chaperone Hfq in Controlling Adherent-Invasive Escherichia coli Colonization and Virulence

(2011) Karina T. Simonsen et al.   PLoS One

Profound differences in the transcriptome of Campylobacter jejuni grown in two different, widely used, microaerobic atmospheres

(2011) Amy John et al.   RESEARCH IN MICROBIOLOGY

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Detailed In Vivo Analysis of the Role of Helicobacter pylori Fur in Colonization and Disease

(2010) S. Miles et al.   INFECTION AND IMMUNITY

The primary transcriptome of the major human pathogen Helicobacter pylori

(2010) Cynthia M. Sharma et al.   NATURE

CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea

(2010) Luciano A. Marraffini et al.   NATURE REVIEWS GENETICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Reduction of fumarate, mesaconate and crotonate by Mfr, a novel oxygen-regulated periplasmic reductase inCampylobacter jejuni

(2009) Edward Guccione et al.   ENVIRONMENTAL MICROBIOLOGY

Next generation sequencing of microbial transcriptomes: challenges and opportunities

(2009) Arnoud H.M. van Vliet   FEMS MICROBIOLOGY LETTERS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

The RNA Chaperone Hfq Is Involved in Stress Response and Virulence in Neisseria meningitidis and Is a Pleiotropic Regulator of Protein Expression

(2009) L. Fantappie et al.   INFECTION AND IMMUNITY

Functional Characterization of Excision Repair and RecA-Dependent Recombinational DNA Repair in Campylobacter jejuni

(2009) E. J. Gaasbeek et al.   JOURNAL OF BACTERIOLOGY

Identification and characterization of the aspartate chemosensory receptor ofCampylobacter jejuni

(2009) Lauren E. Hartley-Tassell et al.   MOLECULAR MICROBIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Utilization of Lactoferrin-Bound and Transferrin-Bound Iron by Campylobacter jejuni

(2008) C. E. Miller et al.   JOURNAL OF BACTERIOLOGY

Determination of rpoA as the most suitable internal control to study stress response in C. jejuni by RT-qPCR and application to oxidative stress

(2008) M. Ritz et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Pyruvate relieves the necessity of high induction levels of catalase and enables Campylobacter jejuni to grow under fully aerobic conditions

(2008) L. Verhoeff-Bakkenes et al.   LETTERS IN APPLIED MICROBIOLOGY

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Key Role of Mfd in the Development of Fluoroquinolone Resistance in Campylobacter jejuni

(2008) Jing Han et al.   PLoS Pathogens