Molecular Phylogeny of a RING E3 Ubiquitin Ligase, Conserved in Eukaryotic Cells and Dominated by Homologous Components, the Muskelin/RanBPM/CTLH Complex

Vid30 is required for the association of Vid vesicles and actin patches in the vacuole import and degradation pathway

(2012) Abbas A. Alibhoy et al.   Autophagy

Interactions of an Arabidopsis RanBPM homologue with LisH-CTLH domain proteins revealed high conservation of CTLH complexes in eukaryotes

(2012) Eva Tomaštíková et al.   BMC PLANT BIOLOGY

Exploring the Topology of the Gid Complex, the E3 Ubiquitin Ligase Involved in Catabolite-induced Degradation of Gluconeogenic Enzymes

(2012) Ruth Menssen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A Ubiquitin Ligase of Symbiosis Receptor Kinase Involved in Nodule Organogenesis

(2012) S. Yuan et al.   PLANT PHYSIOLOGY

The evolutionary history of haptophytes and cryptophytes: phylogenomic evidence for separate origins

(2012) F. Burki et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

The Cullin-RING E3 Ubiquitin Ligase CRL4−DCAF1 Complex Dimerizes via a Short Helical Region in DCAF1

(2011) Jinwoo Ahn et al.   BIOCHEMISTRY

RanBPM is essential for mouse spermatogenesis and oogenesis

(2011) S. Puverel et al.   DEVELOPMENT

Diverse roles of the scaffolding protein RanBPM

(2011) Bharathi Suresh et al.   DRUG DISCOVERY TODAY

Gid9, a second RING finger protein contributes to the ubiquitin ligase activity of the Gid complex required for catabolite degradation

(2011) Bernhard Braun et al.   FEBS LETTERS

Muskelin Regulates Actin Filament- and Microtubule-Based GABAA Receptor Transport in Neurons

(2011) Frank F. Heisler et al.   NEURON

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

Evaluating Ortholog Prediction Algorithms in a Yeast Model Clade

(2011) Leonidas Salichos et al.   PLoS One

Comparative Functional Genomics of the Fission Yeasts

(2011) N. Rhind et al.   SCIENCE

The Incredible Expanding Ancestor of Eukaryotes

(2010) Eugene V. Koonin   CELL

The Genome of Naegleria gruberi Illuminates Early Eukaryotic Versatility

(2010) Lillian K. Fritz-Laylin et al.   CELL

YPEL5 protein of the YPEL gene family is involved in the cell cycle progression by interacting with two distinct proteins RanBPM and RanBP10

(2010) Katsuhiro Hosono et al.   GENOMICS

Stability and Function of Mammalian Lethal Giant Larvae-1 Oncoprotein Are Regulated by the Scaffolding Protein RanBPM

(2010) Bharathi Suresh et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Fructose 1,6-bisphosphate aldolase/phosphatase may be an ancestral gluconeogenic enzyme

(2010) Rafael F. Say et al.   NATURE

Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group

(2010) Takuro Nunoura et al.   NUCLEIC ACIDS RESEARCH

Broadly Sampled Multigene Analyses Yield a Well-Resolved Eukaryotic Tree of Life

(2010) Laura Wegener Parfrey et al.   SYSTEMATIC BIOLOGY

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

RING Domain E3 Ubiquitin Ligases

(2009) Raymond J. Deshaies et al.   Annual Review of Biochemistry

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Analysis of Rare Genomic Changes Does Not Support the Unikont–Bikont Phylogeny and Suggests Cyanobacterial Symbiosis as the Point of Primary Radiation of Eukaryotes

(2009) Igor B. Rogozin et al.   Genome Biology and Evolution

Novel Role of RanBP9 in BACE1 Processing of Amyloid Precursor Protein and Amyloid β Peptide Generation

(2009) Madepalli K. Lakshmana et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Regulation of mu opioid receptor internalization by the scaffold protein RanBPM

(2009) Jeffery N. Talbot et al.   NEUROSCIENCE LETTERS

Rapid and Accurate Large-Scale Coestimation of Sequence Alignments and Phylogenetic Trees

(2009) K. Liu et al.   SCIENCE

Proteasome-dependent degradation of α-catenin is regulated by interaction with ARMc8α

(2008) Takeyuki Suzuki et al.   BIOCHEMICAL JOURNAL

Requirement for erythroblast-macrophage protein (Emp) in definitive erythropoiesis

(2008) Shivani Soni et al.   BLOOD CELLS MOLECULES AND DISEASES

RanBPM regulates cell shape, arrangement, and capacity of the female germline stem cell niche inDrosophila melanogaster

(2008) David A. Dansereau et al.   JOURNAL OF CELL BIOLOGY

Novel role of the muskelin–RanBP9 complex as a nucleocytoplasmic mediator of cell morphology regulation

(2008) Manojkumar Valiyaveettil et al.   JOURNAL OF CELL BIOLOGY

The Yeast GID Complex, a Novel Ubiquitin Ligase (E3) Involved in the Regulation of Carbohydrate Metabolism

(2008) Olivier Santt et al.   MOLECULAR BIOLOGY OF THE CELL

The Jpred 3 secondary structure prediction server

(2008) C. Cole et al.   NUCLEIC ACIDS RESEARCH

Genome-Wide and Functional Annotation of Human E3 Ubiquitin Ligases Identifies MULAN, a Mitochondrial E3 that Regulates the Organelle's Dynamics and Signaling

(2008) Wei Li et al.   PLoS One

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY