Efficient Sampling in Fragment-Based Protein Structure Prediction Using an Estimation of Distribution Algorithm

A Probabilistic Fragment-Based Protein Structure Prediction Algorithm

(2012) David Simoncini et al.   PLoS One

De novo prediction of protein folding pathways and structure using the principle of sequential stabilization

(2012) A. N. Adhikari et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Overview of theCCP4 suite and current developments

(2011) Martyn D. Winn et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Entropy-accelerated exact clustering of protein decoys

(2011) F. Berenger et al.   BIOINFORMATICS

Generalized Fragment Picking in Rosetta: Design, Protocols and Applications

(2011) Dominik Gront et al.   PLoS One

CASP9 assessment of free modeling target predictions

(2011) Lisa Kinch et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Sampling Bottlenecks in De novo Protein Structure Prediction

(2009) David E. Kim et al.   JOURNAL OF MOLECULAR BIOLOGY

Mimicking the folding pathway to improve homology-free protein structure prediction

(2009) J. DeBartolo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fragment-HMM: A new approach to protein structure prediction

(2008) Shuai Cheng Li et al.   PROTEIN SCIENCE