Improved Computational Target Site Prediction for Pentatricopeptide Repeat RNA Editing Factors
Published 2013 View Full Article
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Title
Improved Computational Target Site Prediction for Pentatricopeptide Repeat RNA Editing Factors
Authors
Keywords
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Journal
PLoS One
Volume 8, Issue 6, Pages e65343
Publisher
Public Library of Science (PLoS)
Online
2013-06-07
DOI
10.1371/journal.pone.0065343
References
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Related references
Note: Only part of the references are listed.- Contiguous RNA editing sites in the mitochondrialnad1transcript ofArabidopsis thalianaare recognized by different proteins
- (2013) Anita Arenas-M et al. FEBS LETTERS
- Elucidation of the RNA Recognition Code for Pentatricopeptide Repeat Proteins Involved in Organelle RNA Editing in Plants
- (2013) Yusuke Yagi et al. PLoS One
- Two Related RNA-editing Proteins Target the Same Sites in Mitochondria ofArabidopsis thaliana
- (2012) Daniil Verbitskiy et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Using multiplex single-base extension typing to screen for mutants defective in RNA editing
- (2012) Mizuki Takenaka et al. Nature Protocols
- Mechanistic Insight into Pentatricopeptide Repeat Proteins as Sequence-Specific RNA-Binding Proteins for Organellar RNAs in Plants
- (2012) T. Nakamura et al. PLANT AND CELL PHYSIOLOGY
- SLO2, a mitochondrial pentatricopeptide repeat protein affecting several RNA editing sites, is required for energy metabolism
- (2012) Qiang Zhu et al. PLANT JOURNAL
- A Combinatorial Amino Acid Code for RNA Recognition by Pentatricopeptide Repeat Proteins
- (2012) Alice Barkan et al. PLoS Genetics
- The evolution of RNA editing and pentatricopeptide repeat genes
- (2011) Sota Fujii et al. NEW PHYTOLOGIST
- Classification of pseudo pairs between nucleotide bases and amino acids by analysis of nucleotide–protein complexes
- (2011) Jiro Kondo et al. NUCLEIC ACIDS RESEARCH
- Identification and characterization of the RNA binding surface of the pentatricopeptide repeat protein
- (2011) Keiko Kobayashi et al. NUCLEIC ACIDS RESEARCH
- The E-Class PPR Protein MEF3 of Arabidopsis thaliana Can Also Function in Mitochondrial RNA Editing With an Additional DYW Domain
- (2011) D. Verbitskiy et al. PLANT AND CELL PHYSIOLOGY
- Selection patterns on restorer-like genes reveal a conflict between nuclear and mitochondrial genomes throughout angiosperm evolution
- (2011) S. Fujii et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The involvement of a PPR protein of the P subfamily in partial RNA editing of an Arabidopsis mitochondrial transcript
- (2010) Yoko Doniwa et al. GENE
- Reverse Genetic Screening Identifies Five E-class PPR Proteins Involved in RNA Editing in Mitochondria ofArabidopsis thaliana
- (2010) Mizuki Takenaka et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Pentatricopeptide Repeat Proteins with the DYW Motif Have Distinct Molecular Functions in RNA Editing and RNA Cleavage in Arabidopsis Chloroplasts
- (2009) K. Okuda et al. PLANT CELL
- The PPR protein encoded by theLOVASTATIN INSENSITIVE 1gene is involved in RNA editing at three sites in mitochondria ofArabidopsis thaliana
- (2009) Daniil Verbitskiy et al. PLANT JOURNAL
- Breaking the Code of DNA Binding Specificity of TAL-Type III Effectors
- (2009) J. Boch et al. SCIENCE
- Pentatricopeptide repeat proteins: a socket set for organelle gene expression
- (2008) C SCHMITZLINNEWEBER et al. TRENDS IN PLANT SCIENCE
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