Mechanistic Insight into Pentatricopeptide Repeat Proteins as Sequence-Specific RNA-Binding Proteins for Organellar RNAs in Plants

Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants

(2012) M. Takenaka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA editing in plant organelles. Why make it easy?

(2011) B. Castandet et al.   BIOCHEMISTRY-MOSCOW

The DYW-E-PPR protein MEF14 is required for RNA editing at sitematR-1895 in mitochondria ofArabidopsis thaliana

(2011) Daniil Verbitskiy et al.   FEBS LETTERS

A Point Mutation in the Pentatricopeptide repeat Motif of the AtECB2 Protein Causes Delayed Chloroplast DevelopmentF

(2011) Zhi-Lin Cao et al.   Journal of Integrative Plant Biology

The RNA-recognition motif in chloroplasts

(2011) Hannes Ruwe et al.   JOURNAL OF PLANT PHYSIOLOGY

Revisiting the Yeast PPR Proteins—Application of an Iterative Hidden Markov Model Algorithm Reveals New Members of the Rapidly Evolving Family

(2011) Kamil A. Lipinski et al.   MOLECULAR BIOLOGY AND EVOLUTION

Structure of human mitochondrial RNA polymerase

(2011) Rieke Ringel et al.   NATURE

The evolution of RNA editing and pentatricopeptide repeat genes

(2011) Sota Fujii et al.   NEW PHYTOLOGIST

Protein-mediated protection as the predominant mechanism for defining processed mRNA termini in land plant chloroplasts

(2011) Petya Zhelyazkova et al.   NUCLEIC ACIDS RESEARCH

Short non-coding RNA fragments accumulating in chloroplasts: footprints of RNA binding proteins?

(2011) Hannes Ruwe et al.   NUCLEIC ACIDS RESEARCH

Identification and characterization of the RNA binding surface of the pentatricopeptide repeat protein

(2011) Keiko Kobayashi et al.   NUCLEIC ACIDS RESEARCH

PROTON GRADIENT REGULATION 3 recognizes multiple targets with limited similarity and mediates translation and RNA stabilization in plastids

(2011) Wenhe Cai et al.   PLANT JOURNAL

Expression of Plastid Genes: Organelle-Specific Elaborations on a Prokaryotic Scaffold

(2011) A. Barkan   PLANT PHYSIOLOGY

Nucleoid-Enriched Proteomes in Developing Plastids and Chloroplasts from Maize Leaves: A New Conceptual Framework for Nucleoid Functions

(2011) W. Majeran et al.   PLANT PHYSIOLOGY

RNA PROCESSING FACTOR3 Is Crucial for the Accumulation of Mature ccmC Transcripts in Mitochondria of Arabidopsis Accession Columbia

(2011) C. Jonietz et al.   PLANT PHYSIOLOGY

Selection patterns on restorer-like genes reveal a conflict between nuclear and mitochondrial genomes throughout angiosperm evolution

(2011) S. Fujii et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Function of chloroplast RNA-binding proteins

(2010) Jessica Jacobs et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

MRL1, a Conserved Pentatricopeptide Repeat Protein, Is Required for Stabilization of rbcL mRNA in Chlamydomonas and Arabidopsis

(2010) X. Johnson et al.   PLANT CELL

RNA PROCESSING FACTOR2 Is Required for 5' End Processing of nad9 and cox3 mRNAs in Mitochondria of Arabidopsis thaliana

(2010) C. Jonietz et al.   PLANT CELL

Interaction of the pentatricopeptide-repeat protein DELAYED GREENING 1 with sigma factor SIG6 in the regulation of chloroplast gene expression in Arabidopsis cotyledons

(2010) Wei Chi et al.   PLANT JOURNAL

The moss pentatricopeptide repeat protein with a DYW domain is responsible for RNA editing of mitochondrial ccmFc transcript

(2010) Eiji Tasaki et al.   PLANT JOURNAL

A RESTORER OF FERTILITY-like PPR gene is required for 5′-end processing of the nad4 mRNA in mitochondria of Arabidopsis thaliana

(2010) Angela Hölzle et al.   PLANT JOURNAL

Mechanism of RNA stabilization and translational activation by a pentatricopeptide repeat protein

(2010) J. Prikryl et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Site-specific binding of a PPR protein defines and stabilizes 5′ and 3′ mRNA termini in chloroplasts

(2009) Jeannette Pfalz et al.   EMBO JOURNAL

Protein structure prediction on the Web: a case study using the Phyre server

(2009) Lawrence A Kelley et al.   Nature Protocols

Pentatricopeptide Repeat Proteins with the DYW Motif Have Distinct Molecular Functions in RNA Editing and RNA Cleavage in Arabidopsis Chloroplasts

(2009) K. Okuda et al.   PLANT CELL

A DYW Domain-Containing Pentatricopeptide Repeat Protein Is Required for RNA Editing at Multiple Sites in Mitochondria of Arabidopsis thaliana

(2009) A. Zehrmann et al.   PLANT CELL

A Study of New Arabidopsis Chloroplast RNA Editing Mutants Reveals General Features of Editing Factors and Their Target Sites

(2009) K. Hammani et al.   PLANT CELL

The pentatricopeptide repeat protein OTP82 is required for RNA editing of plastid ndhB and ndhG transcripts

(2009) Kenji Okuda et al.   PLANT JOURNAL

The PPR protein encoded by theLOVASTATIN INSENSITIVE 1gene is involved in RNA editing at three sites in mitochondria ofArabidopsis thaliana

(2009) Daniil Verbitskiy et al.   PLANT JOURNAL

The mitochondrial PPR protein LOVASTATIN INSENSITIVE 1 plays regulatory roles in cytosolic and plastidial isoprenoid biosynthesis through RNA editing

(2009) Jianwei Tang et al.   PLANT JOURNAL

LPA66 Is Required for Editing psbF Chloroplast Transcripts in Arabidopsis

(2009) W. Cai et al.   PLANT PHYSIOLOGY

Incompatibility of Nuclear and Mitochondrial Genomes Causes Hybrid Sterility between Two Yeast Species

(2008) Hsin-Yi Lee et al.   CELL

A conserved DYW domain of the pentatricopeptide repeat protein possesses a novel endoribonuclease activity

(2008) Takahiro Nakamura et al.   FEBS LETTERS

On the Expansion of the Pentatricopeptide Repeat Gene Family in Plants

(2008) N. O'Toole et al.   MOLECULAR BIOLOGY AND EVOLUTION

Characterization of Raphanus sativus Pentatricopeptide Repeat Proteins Encoded by the Fertility Restorer Locus for Ogura Cytoplasmic Male Sterility

(2008) M. Uyttewaal et al.   PLANT CELL

Suppression mechanism of mitochondrial ORF79 accumulation by Rf1 protein in BT-type cytoplasmic male sterile rice

(2008) Tomohiko Kazama et al.   PLANT JOURNAL

The pentatricopeptide repeat geneOTP51with two LAGLIDADG motifs is required for thecis-splicing of plastidycf3intron 2 inArabidopsis thaliana

(2008) Andéol Falcon de Longevialle et al.   PLANT JOURNAL

Structures of Human Pumilio with Noncognate RNAs Reveal Molecular Mechanisms for Binding Promiscuity

(2008) Yogesh K. Gupta et al.   STRUCTURE

Pentatricopeptide repeat proteins: a socket set for organelle gene expression

(2008) C SCHMITZLINNEWEBER et al.   TRENDS IN PLANT SCIENCE

Plastid signalling to the nucleus and beyond

(2008) Barry J. Pogson et al.   TRENDS IN PLANT SCIENCE

PPR336 is Associated with Polysomes in Plant Mitochondria

(2007) Magalie Uyttewaal et al.   JOURNAL OF MOLECULAR BIOLOGY