Game On, Science - How Video Game Technology May Help Biologists Tackle Visualization Challenges

Intuitive representation of surface properties of biomolecules using BioBlender

(2012) Raluca Andrei et al.   BMC BIOINFORMATICS

The case for open computer programs

(2012) Darrel C. Ince et al.   NATURE

Increased Diels-Alderase activity through backbone remodeling guided by Foldit players

(2012) Christopher B Eiben et al.   NATURE BIOTECHNOLOGY

Phylo: A Citizen Science Approach for Improving Multiple Sequence Alignment

(2012) Alexander Kawrykow et al.   PLoS One

Archaeal RNA polymerase: the influence of the protruding stalk in crystal packing and preliminary biophysical analysis of the Rpo13 subunit

(2011) Magdalena Wojtas et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Acetylcholine binding protein (AChBP) as template for hierarchical in silico screening procedures to identify structurally novel ligands for the nicotinic receptors

(2011) Atilla Akdemir et al.   BIOORGANIC & MEDICINAL CHEMISTRY

GPU-powered tools boost molecular visualization

(2011) M. Chavent et al.   BRIEFINGS IN BIOINFORMATICS

Crystal structure of theHaemophilus influenzaeHap adhesin reveals an intercellular oligomerization mechanism for bacterial aggregation

(2011) Guoyu Meng et al.   EMBO JOURNAL

GPU-accelerated atom and dynamic bond visualization using hyperballs: A unified algorithm for balls, sticks, and hyperboloids

(2011) Matthieu Chavent et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

MDAnalysis: A toolkit for the analysis of molecular dynamics simulations

(2011) Naveen Michaud-Agrawal et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Crystal Structure of α-Galactosidase from Lactobacillus acidophilus NCFM: Insight into Tetramer Formation and Substrate Binding

(2011) Folmer Fredslund et al.   JOURNAL OF MOLECULAR BIOLOGY

Designed ankyrin repeat protein binders for the crystallization of AcrB: Plasticity of the dominant interface

(2011) Nicole Monroe et al.   JOURNAL OF STRUCTURAL BIOLOGY

The power of many

(2011) Clare Sansom   NATURE BIOTECHNOLOGY

Crystal structure of a monomeric retroviral protease solved by protein folding game players

(2011) Firas Khatib et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structure of the ATP synthase catalytic complex (F1) from Escherichia coli in an autoinhibited conformation

(2011) Gino Cingolani et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

ePMV Embeds Molecular Modeling into Professional Animation Software Environments

(2011) Graham T. Johnson et al.   STRUCTURE

Importance of Arg-599 of β-galactosidase (Escherichia coli) as an anchor for the open conformations of Phe-601 and the active-site loop

(2010) Megan L. Dugdale et al.   Biochemistry and Cell Biology

Cytoscape 2.8: new features for data integration and network visualization

(2010) M. E. Smoot et al.   BIOINFORMATICS

Predicting protein structures with a multiplayer online game

(2010) Seth Cooper et al.   NATURE

Visualization of image data from cells to organisms

(2010) Thomas Walter et al.   NATURE METHODS

Visualization of macromolecular structures

(2010) Seán I O'Donoghue et al.   NATURE METHODS

Visualization of omics data for systems biology

(2010) Nils Gehlenborg et al.   NATURE METHODS

Animating the model figure

(2010) Janet H. Iwasa   TRENDS IN CELL BIOLOGY

New Citizens for the Life Sciences

(2009) Laura Bonetta   CELL

Interactive Visualization of Molecular Surface Dynamics

(2009) M. Krone et al.   IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS

Complex molecular assemblies at hand via interactive simulations

(2009) Olivier Delalande et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Video Games: A Route to Large-Scale STEM Education?

(2009) M. J. Mayo   SCIENCE

ProteinShader: illustrative rendering of macromolecules

(2009) Joseph R Weber   BMC STRUCTURAL BIOLOGY

Molecular Movies… Coming to a Lecture near You

(2008) Gaël McGill   CELL

MetaMol: High-quality visualization of molecular skin surface

(2008) Matthieu Chavent et al.   JOURNAL OF MOLECULAR GRAPHICS & MODELLING