How Difficult Is It to Fold a Knotted Protein? In Silico Insights from Surface-Tethered Folding Experiments

Coupled Folding-Binding in a Hydrophobic/Polar Protein Model: Impact of Synergistic Folding and Disordered Flanks

(2012) Arnab Bhattacherjee et al.   BIOPHYSICAL JOURNAL

Trigger Factor Slows Co-translational Folding through Kinetic Trapping while Sterically Protecting the Nascent Chain from Aberrant Cytosolic Interactions

(2012) Edward P. O’Brien et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

pKNOT v.2: the protein KNOT web server

(2012) Y.-L. Lai et al.   NUCLEIC ACIDS RESEARCH

Why Do Protein Folding Rates Correlate with Metrics of Native Topology?

(2012) Patrícia F. N. Faísca et al.   PLoS One

Energy landscape of knotted protein folding

(2012) J. I. Sulkowska et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Conservation of complex knotting and slipknotting patterns in proteins

(2012) J. I. Sulkowska et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Role of Non-Native Interactions in the Folding of Knotted Proteins

(2012) Tatjana Škrbić et al.   PLoS Computational Biology

New Scenarios of Protein Folding Can Occur on the Ribosome

(2011) Edward P. O’Brien et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Knot formation in newly translated proteins is spontaneous and accelerated by chaperonins

(2011) Anna L Mallam et al.   Nature Chemical Biology

Protein stabilization in a highly knotted protein polymer

(2011) T. C. Sayre et al.   PROTEIN ENGINEERING DESIGN & SELECTION

Transient Tertiary Structure Formation within the Ribosome Exit Port

(2010) Edward P. O’Brien et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Untying Knots in Proteins

(2010) Joanna I. Sułkowska et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Factors Governing Fibrillogenesis of Polypeptide Chains Revealed by Lattice Models

(2010) Mai Suan Li et al.   PHYSICAL REVIEW LETTERS

Slipknotting upon native-like loop formation in a trefoil knot protein

(2010) J. K. Noel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Experimental detection of knotted conformations in denatured proteins

(2010) A. L. Mallam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure and folding of a designed knotted protein

(2010) N. P. King et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Principles of protein folding - A perspective from simple exact models

(2010) Ken A. Dill et al.   PROTEIN SCIENCE

Non-native interactions play an effective role in protein folding dynamics

(2010) Patrícia F. N. Faísca et al.   PROTEIN SCIENCE

A Stevedore's Protein Knot

(2010) Daniel Bölinger et al.   PLoS Computational Biology

Untangling the folding mechanism of the 52-knotted protein UCH-L3

(2009) Fredrik I. Andersson et al.   FEBS Journal

Dodging the crisis of folding proteins with knots

(2009) J. I. Sulkowska et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identifying critical residues in protein folding: Insights from φ-value and P[sub fold] analysis

(2008) P. F. N. Faísca et al.   JOURNAL OF CHEMICAL PHYSICS

Knotted Fusion Proteins Reveal Unexpected Possibilities in Protein Folding

(2008) Anna L. Mallam et al.   MOLECULAR CELL

Stabilizing effect of knots on proteins

(2008) J. I. Sulkowska et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Exploring knotting mechanisms in protein folding

(2008) A. L. Mallam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA