Symbiodinium Transcriptomes: Genome Insights into the Dinoflagellate Symbionts of Reef-Building Corals
Published 2012 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Symbiodinium Transcriptomes: Genome Insights into the Dinoflagellate Symbionts of Reef-Building Corals
Authors
Keywords
Dinoflagellates, Histones, Transcription factors, Protein domains, Transcriptome analysis, Transcriptional control, Sequence motif analysis, Eukaryota
Journal
PLoS One
Volume 7, Issue 4, Pages e35269
Publisher
Public Library of Science (PLoS)
Online
2012-04-19
DOI
10.1371/journal.pone.0035269
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Unexpected complexity of the Reef-Building Coral Acropora millepora transcription factor network
- (2011) Taewoo Ryu et al. BMC Systems Biology
- Differential sensitivity of coral larvae to natural levels of ultraviolet radiation during the onset of larval competence
- (2011) MANUEL ARANDA et al. MOLECULAR ECOLOGY
- HMMER web server: interactive sequence similarity searching
- (2011) R. D. Finn et al. NUCLEIC ACIDS RESEARCH
- Protein synthesis is the primary target of reactive oxygen species in the photoinhibition of photosystem II
- (2011) Yoshitaka Nishiyama et al. PHYSIOLOGIA PLANTARUM
- Rapid Evolution of Coral Proteins Responsible for Interaction with the Environment
- (2011) Christian R. Voolstra et al. PLoS One
- Identification of Fast-Evolving Genes in the Scleractinian Coral Acropora Using Comparative EST Analysis
- (2011) Akira Iguchi et al. PLoS One
- Genomic understanding of dinoflagellates
- (2011) Senjie Lin RESEARCH IN MICROBIOLOGY
- Eukaryotic cold shock domain proteins: highly versatile regulators of gene expression
- (2010) Marija Mihailovich et al. BIOESSAYS
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Genomic Survey of Candidate Stress-Response Genes in the Estuarine Anemone Nematostella vectensis
- (2010) Adam M. Reitzel et al. BIOLOGICAL BULLETIN
- Profiling Differential Gene Expression of Symbiotic and Aposymbiotic Corals Using a High Coverage Gene Expression Profiling (HiCEP) Analysis
- (2010) Ikuko Yuyama et al. MARINE BIOTECHNOLOGY
- Development and heat stress-induced transcriptomic changes during embryogenesis of the scleractinian coral Acropora palmata
- (2010) Kevin J. Portune et al. Marine Genomics
- Coral larvae exhibit few measurable transcriptional changes during the onset of coral-dinoflagellate endosymbiosis
- (2010) Christine E. Schnitzler et al. Marine Genomics
- The Apicomplexan AP2 family: Integral factors regulating Plasmodium development
- (2010) Heather J. Painter et al. MOLECULAR AND BIOCHEMICAL PARASITOLOGY
- Dynamics of Actin Evolution in Dinoflagellates
- (2010) Sunju Kim et al. MOLECULAR BIOLOGY AND EVOLUTION
- Coral host transcriptomic states are correlated withSymbiodiniumgenotypes
- (2010) M. K. DeSALVO et al. MOLECULAR ECOLOGY
- A new Symbiodinium clade (Dinophyceae) from soritid foraminifera in Hawai’i
- (2010) Xavier Pochon et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Synonymous but not the same: the causes and consequences of codon bias
- (2010) Joshua B. Plotkin et al. NATURE REVIEWS GENETICS
- Novel Regulators in Photosynthetic Redox Control of Plant Metabolism and Gene Expression
- (2010) K.-J. Dietz et al. PLANT PHYSIOLOGY
- Reactive oxygen species and antioxidant machinery in abiotic stress tolerance in crop plants
- (2010) Sarvajeet Singh Gill et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- Transcriptome Profiling of a Toxic Dinoflagellate Reveals a Gene-Rich Protist and a Potential Impact on Gene Expression Due to Bacterial Presence
- (2010) Ahmed Moustafa et al. PLoS One
- Spliced leader-based metatranscriptomic analyses lead to recognition of hidden genomic features in dinoflagellates
- (2010) S. Lin et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
- (2010) Stéphane Guindon et al. SYSTEMATIC BIOLOGY
- Generation and analysis of transcriptomic resources for a model system on the rise: the sea anemone Aiptasia pallida and its dinoflagellate endosymbiont
- (2009) Shinichi Sunagawa et al. BMC GENOMICS
- In silicoanalysis of nickel containing superoxide dismutase evolution and regulation
- (2009) Astrid Schmidt et al. JOURNAL OF BASIC MICROBIOLOGY
- Histone Chaperones ASF1 and NAP1 Differentially Modulate Removal of Active Histone Marks by LID-RPD3 Complexes during NOTCH Silencing
- (2009) Yuri M. Moshkin et al. MOLECULAR CELL
- The host transcriptome remains unaltered during the establishment of coral-algal symbioses
- (2009) CHRISTIAN R. VOOLSTRA et al. MOLECULAR ECOLOGY
- Comparative Genomic Study of the Thioredoxin Family in Photosynthetic Organisms with Emphasis on Populus trichocarpa
- (2009) Kamel Chibani et al. Molecular Plant
- BioMart Central Portal—unified access to biological data
- (2009) Syed Haider et al. NUCLEIC ACIDS RESEARCH
- Distinct Gene Number-Genome Size Relationships for Eukaryotes and Non-Eukaryotes: Gene Content Estimation for Dinoflagellate Genomes
- (2009) Yubo Hou et al. PLoS One
- Selection on Codon Bias
- (2008) Ruth Hershberg et al. Annual Review of Genetics
- A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome
- (2008) T. N. Mavrich et al. GENOME RESEARCH
- Cellular mechanisms of Cnidarian bleaching: stress causes the collapse of symbiosis
- (2008) V. M. Weis JOURNAL OF EXPERIMENTAL BIOLOGY
- Early Evolution of Histone Genes: Prevalence of an ‘Orphon’ H1 Lineage in Protostomes and Birth-and-Death Process in the H2A Family
- (2008) Rodrigo González-Romero et al. JOURNAL OF MOLECULAR EVOLUTION
- Differential gene expression during thermal stress and bleaching in the Caribbean coralMontastraea faveolata
- (2008) M. K. DESALVO et al. MOLECULAR ECOLOGY
- Nucleosome organization in the Drosophila genome
- (2008) Travis N. Mavrich et al. NATURE
- Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks
- (2008) Daniel Zilberman et al. NATURE
- Horizontal gene transfer in eukaryotic evolution
- (2008) Patrick J. Keeling et al. NATURE REVIEWS GENETICS
- PlasmoDB: a functional genomic database for malaria parasites
- (2008) C. Aurrecoechea et al. NUCLEIC ACIDS RESEARCH
- Comparative genomics of transcription factors and chromatin proteins in parasitic protists and other eukaryotes
- (2007) Lakshminarayan M. Iyer et al. INTERNATIONAL JOURNAL FOR PARASITOLOGY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started