Design Novel Dual Agonists for Treating Type-2 Diabetes by Targeting Peroxisome Proliferator-Activated Receptors with Core Hopping Approach

Identification of Proteins Interacting with Human SP110 During the Process of Viral Infections

(2012) Lei Cai et al.   Medicinal Chemistry

iNR-PhysChem: A Sequence-Based Predictor for Identifying Nuclear Receptors and Their Subfamilies via Physical-Chemical Property Matrix

(2012) Xuan Xiao et al.   PLoS One

iLoc-Hum: using the accumulation-label scale to predict subcellular locations of human proteins with both single and multiple sites

(2011) Kuo-Chen Chou et al.   Molecular BioSystems

iLoc-Euk: A Multi-Label Classifier for Predicting the Subcellular Localization of Singleplex and Multiplex Eukaryotic Proteins

(2011) Kuo-Chen Chou et al.   PLoS One

Insights from Modeling the 3D Structure of New Delhi Metallo-β-Lactamse and Its Binding Interactions with Antibiotic Drugs

(2011) Jing-Fang Wang et al.   PLoS One

NR-2L: A Two-Level Predictor for Identifying Nuclear Receptor Subfamilies Based on Sequence-Derived Features

(2011) Pu Wang et al.   PLoS One

Novel Inhibitor Design for Hemagglutinin against H1N1 Influenza Virus by Core Hopping Method

(2011) Xiao-Bo Li et al.   PLoS One

3D-QSAR Study on a Series of Bcl-2 Protein Inhibitors Using Comparative Molecular Field Analysis

(2011) Xuben Hou et al.   PROTEIN AND PEPTIDE LETTERS

Diabetes area participation analysis: a review of companies and targets described in the 2008 – 2010 patent literature

(2010) Philip A Carpino et al.   EXPERT OPINION ON THERAPEUTIC PATENTS

Docking and Molecular Dynamics Study on the Inhibitory Activity of Novel Inhibitors on Epidermal Growth Factor Receptor (EGFR)

(2010) Qing-Hua Liao et al.   Medicinal Chemistry

GPCR-2L: predicting G protein-coupled receptors and their types by hybridizing two different modes of pseudo amino acid compositions

(2010) Xuan Xiao et al.   Molecular BioSystems

Insight into the molecular switch mechanism of human Rab5a from molecular dynamics simulations

(2009) Jing-Fang Wang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Prediction of Enzyme Classes from 3D Structure: A General Model and Examples of Experimental-Theoretic Scoring of Peptide Mass Fingerprints ofLeishmaniaProteins

(2009) Riccardo Concu et al.   JOURNAL OF PROTEOME RESEARCH

Virtual Screening as a Technique for PPAR Modulator Discovery

(2009) Stephanie N. Lewis et al.   PPAR Research

HIVcleave: a web-server for predicting human immunodeficiency virus protease cleavage sites in proteins

(2008) Hong-Bin Shen et al.   ANALYTICAL BIOCHEMISTRY

Unified QSAR approach to antimicrobials. Part 3: First multi-tasking QSAR model for Input-Coded prediction, structural back-projection, and complex networks clustering of antiprotozoal compounds

(2008) Francisco J. Prado-Prado et al.   BIOORGANIC & MEDICINAL CHEMISTRY

HP-Lattice QSAR for dynein proteins: Experimental proteomics (2D-electrophoresis, mass spectrometry) and theoretic study of a Leishmania infantum sequence

(2008) María Auxiliadora Dea-Ayuela et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Unified QSAR approach to antimicrobials. 4. Multi-target QSAR modeling and comparative multi-distance study of the giant components of antiviral drug–drug complex networks

(2008) Francisco J. Prado-Prado et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Fragment-based quantitative structure-activity relationship (FB-QSAR) for fragment-based drug design

(2008) Qi-Shi Du et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Protein Polarization Is Critical to Stabilizing AF-2 and Helix-2′ Domains in Ligand Binding to PPAR-γ

(2008) C. G. Ji et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Analysis of ligand binding to proteins using molecular dynamics simulations

(2008) M.R. Housaindokht et al.   JOURNAL OF THEORETICAL BIOLOGY