Genome diversity inBrachypodium distachyon:deep sequencing of highly diverse inbred lines
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Title
Genome diversity inBrachypodium distachyon:deep sequencing of highly diverse inbred lines
Authors
Keywords
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Journal
PLANT JOURNAL
Volume 79, Issue 3, Pages 361-374
Publisher
Wiley
Online
2014-05-31
DOI
10.1111/tpj.12569
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- Brachypodium as a Model for the Grasses: Today and the Future
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- Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads
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- Development of SSR markers and analysis of diversity in Turkish populations of Brachypodium distachyon
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- Advances in Genetical Genomics of Plants
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