The metabolic flux phenotype of heterotrophic Arabidopsis cells reveals a flexible balance between the cytosolic and plastidic contributions to carbohydrate oxidation in response to phosphate limitation

Improvement of phosphorus efficiency in rice on the basis of understanding phosphate signaling and homeostasis

(2013) Ping Wu et al.   CURRENT OPINION IN PLANT BIOLOGY

COMPLETE-MFA: Complementary parallel labeling experiments technique for metabolic flux analysis

(2013) Robert W. Leighty et al.   METABOLIC ENGINEERING

Flux and reflux: metabolite reflux in plant suspension cells and its implications for isotope-assisted metabolic flux analysis

(2013) Shilpa Nargund et al.   Molecular BioSystems

A method for accounting for maintenance costs in flux balance analysis improves the prediction of plant cell metabolic phenotypes under stress conditions

(2013) C. Y. Maurice Cheung et al.   PLANT JOURNAL

The metabolic flux phenotype of heterotrophic Arabidopsis cells reveals a complex response to changes in nitrogen supply

(2013) Shyam K. Masakapalli et al.   PLANT JOURNAL

Functioning of a metabolic flux sensor in Escherichia coli

(2013) K. Kochanowski et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A new class of plant lipid is essential for protection against phosphorus depletion

(2013) Yozo Okazaki et al.   Nature Communications

The response and recovery of the Arabidopsis thaliana transcriptome to phosphate starvation

(2012) Jongchan Woo et al.   BMC PLANT BIOLOGY

Pathways and fluxes: exploring the plant metabolic network

(2012) N. J. Kruger et al.   JOURNAL OF EXPERIMENTAL BOTANY

Insights into metabolic efficiency from flux analysis

(2012) Xuewen Chen et al.   JOURNAL OF EXPERIMENTAL BOTANY

The secreted purple acid phosphatase isozymes AtPAP12 and AtPAP26 play a pivotal role in extracellular phosphate-scavenging by Arabidopsis thaliana

(2012) Whitney D. Robinson et al.   JOURNAL OF EXPERIMENTAL BOTANY

Metabolic cartography: experimental quantification of metabolic fluxes from isotopic labelling studies

(2012) J. O'Grady et al.   JOURNAL OF EXPERIMENTAL BOTANY

Frontiers in metabolic reconstruction and modeling of plant genomes

(2012) S. M. D. Seaver et al.   JOURNAL OF EXPERIMENTAL BOTANY

Parallel labeling experiments with [U-13C]glucose validate E. coli metabolic network model for 13C metabolic flux analysis

(2012) Robert W. Leighty et al.   METABOLIC ENGINEERING

Complementary Proteome and Transcriptome Profiling in Phosphate-deficient Arabidopsis Roots Reveals Multiple Levels of Gene Regulation

(2012) Ping Lan et al.   MOLECULAR & CELLULAR PROTEOMICS

Differential expression of genes involved in alternative glycolytic pathways, phosphorus scavenging and recycling in response to aluminum and phosphorus interactions in Citrus roots

(2012) Lin-Tong Yang et al.   MOLECULAR BIOLOGY REPORTS

The protein kinase Pstol1 from traditional rice confers tolerance of phosphorus deficiency

(2012) Rico Gamuyao et al.   NATURE

On the Discordance of Metabolomics with Proteomics and Transcriptomics: Coping with Increasing Complexity in Logic, Chemistry, and Network Interactions Scientific Correspondence

(2012) A. R. Fernie et al.   PLANT PHYSIOLOGY

Proteomics of phosphate use and deprivation in plants

(2012) Ralitza Alexova et al.   PROTEOMICS

GFAJ-1 Is an Arsenate-Resistant, Phosphate-Dependent Organism

(2012) T. J. Erb et al.   SCIENCE

Towards global phosphorus security: A systems framework for phosphorus recovery and reuse options

(2011) D. Cordell et al.   CHEMOSPHERE

Strategies for investigating the plant metabolic network with steady-state metabolic flux analysis: lessons from an Arabidopsis cell culture and other systems

(2011) N. J. Kruger et al.   JOURNAL OF EXPERIMENTAL BOTANY

Capturing Metabolite Channeling in Metabolic Flux Phenotypes

(2011) T. C. R. Williams et al.   PLANT PHYSIOLOGY

The Role of MicroRNAs in Phosphorus Deficiency Signaling

(2011) H.-F. Kuo et al.   PLANT PHYSIOLOGY

Metabolic Adaptations of Phosphate-Starved Plants

(2011) W. C. Plaxton et al.   PLANT PHYSIOLOGY

Sugar Signaling in Root Responses to Low Phosphorus Availability

(2011) J. P. Hammond et al.   PLANT PHYSIOLOGY

Central metabolic fluxes in the endosperm of developing maize seeds and their implications for metabolic engineering

(2010) Ana P. Alonso et al.   METABOLIC ENGINEERING

Early response of plant cell to carbon deprivation: in vivo31P-NMR spectroscopy shows a quasi-instantaneous disruption on cytosolic sugars, phosphorylated intermediates of energy metabolism, phosphate partitioning, and intracellular pHs

(2010) Elisabeth Gout et al.   NEW PHYTOLOGIST

A Genome-Scale Metabolic Model Accurately Predicts Fluxes in Central Carbon Metabolism under Stress Conditions

(2010) Thomas C.R. Williams et al.   PLANT PHYSIOLOGY

Feeding hungry plants: The role of purple acid phosphatases in phosphate nutrition

(2010) Hue T. Tran et al.   PLANT SCIENCE

In vivoregulatory phosphorylation of the phosphoenolpyruvate carboxylase AtPPC1 in phosphate-starvedArabidopsis thaliana

(2009) Allison L. Gregory et al.   BIOCHEMICAL JOURNAL

Insights into plant metabolic networks from steady-state metabolic flux analysis

(2009) Nicholas J. Kruger et al.   BIOCHIMIE

Metabolic flux analysis in plants: coping with complexity

(2009) DOUG K. ALLEN et al.   PLANT CELL AND ENVIRONMENT

Subcellular Flux Analysis of Central Metabolism in a Heterotrophic Arabidopsis Cell Suspension Using Steady-State Stable Isotope Labeling

(2009) S. K. Masakapalli et al.   PLANT PHYSIOLOGY

Analysis of Metabolic Flux Phenotypes for Two Arabidopsis Mutants with Severe Impairment in Seed Storage Lipid Synthesis

(2009) J. Lonien et al.   PLANT PHYSIOLOGY

Phosphate (Pi) Starvation Effect on the Cytosolic Pi Concentration and Pi Exchanges across the Tonoplast in Plant Cells: An in Vivo 31P-Nuclear Magnetic Resonance Study Using Methylphosphonate as a Pi Analog

(2009) J. Pratt et al.   PLANT PHYSIOLOGY

Metabolic Networks: How to Identify Key Components in the Regulation of Metabolism and Growth

(2009) M. Stitt et al.   PLANT PHYSIOLOGY

Metabolic Flux Analysis in Plants: From Intelligent Design to Rational Engineering

(2008) Igor G.L. Libourel et al.   Annual Review of Plant Biology

1H NMR metabolite fingerprinting and metabolomic analysis of perchloric acid extracts from plant tissues

(2008) Nicholas J Kruger et al.   Nature Protocols

Validation of the design of feeding experiments involving [14C]substrates used to monitor metabolic flux in higher plants

(2008) Peter W. Harrison et al.   PHYTOCHEMISTRY

Metabolite Profiling Reveals Distinct Changes in Carbon and Nitrogen Metabolism in Phosphate-Deficient Barley Plants (Hordeum vulgare L.)

(2008) Chun Y. Huang et al.   PLANT AND CELL PHYSIOLOGY

Metabolic flux maps comparing the effect of temperature on protein and oil biosynthesis in developing soybean cotyledons

(2008) VIDYA V. IYER et al.   PLANT CELL AND ENVIRONMENT

Metabolic Network Fluxes in Heterotrophic Arabidopsis Cells: Stability of the Flux Distribution under Different Oxygenation Conditions

(2008) T. C.R. Williams et al.   PLANT PHYSIOLOGY

Proteomic analysis of alterations in the secretome of Arabidopsis thaliana suspension cells subjected to nutritional phosphate deficiency

(2008) Hue T. Tran et al.   PROTEOMICS