DNAshape: a method for the high-throughput prediction of DNA structural features on a genomic scale
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
DNAshape: a method for the high-throughput prediction of DNA structural features on a genomic scale
Authors
Keywords
-
Journal
NUCLEIC ACIDS RESEARCH
Volume 41, Issue W1, Pages W56-W62
Publisher
Oxford University Press (OUP)
Online
2013-05-24
DOI
10.1093/nar/gkt437
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Probing DNA shape and methylation state on a genomic scale with DNase I
- (2013) A. Lazarovici et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mechanism of Origin DNA Recognition and Assembly of an Initiator-Helicase Complex by SV40 Large Tumor Antigen
- (2013) Y. Paul Chang et al. Cell Reports
- Genomic Regions Flanking E-Box Binding Sites Influence DNA Binding Specificity of bHLH Transcription Factors through DNA Shape
- (2013) Raluca Gordân et al. Cell Reports
- Electrostatic Interactions between Arginines and the Minor Groove in the Nucleosome
- (2012) Sean M. West et al. JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
- Optical Properties of Triplex DNA from Time-Dependent Density Functional Theory
- (2012) Tahereh Ghane et al. JOURNAL OF PHYSICAL CHEMISTRY B
- A Map of Minor Groove Shape and Electrostatic Potential from Hydroxyl Radical Cleavage Patterns of DNA
- (2011) Eric P. Bishop et al. ACS Chemical Biology
- Cofactor Binding Evokes Latent Differences in DNA Binding Specificity between Hox Proteins
- (2011) Matthew Slattery et al. CELL
- Origins of Specificity in Protein-DNA Recognition
- (2010) Remo Rohs et al. Annual Review of Biochemistry
- The shape of the DNA minor groove directs binding by the DNA-bending protein Fis
- (2010) S. Stella et al. GENES & DEVELOPMENT
- Molecular Dynamics of DNA: Comparison of Force Fields and Terminal Nucleotide Definitions
- (2010) Clarisse G. Ricci et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Nuance in the double-helix and its role in protein–DNA recognition
- (2009) Remo Rohs et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- The role of DNA shape in protein–DNA recognition
- (2009) Remo Rohs et al. NATURE
- A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA
- (2009) Richard Lavery et al. NUCLEIC ACIDS RESEARCH
- Local DNA Topography Correlates with Functional Noncoding Regions of the Human Genome
- (2009) S. C. J. Parker et al. SCIENCE
- Nucleosome organization in the Drosophila genome
- (2008) Travis N. Mavrich et al. NATURE
- Towards a molecular dynamics consensus view of B-DNA flexibility
- (2008) Alberto Pérez et al. NUCLEIC ACIDS RESEARCH
- Distinct Modes of Regulation by Chromatin Encoded through Nucleosome Positioning Signals
- (2008) Yair Field et al. PLoS Computational Biology
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More