Dealing with multi-source and multi-scale information in plant phenomics: the ontology-driven Phenotyping Hybrid Information System
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Dealing with multi-source and multi-scale information in plant phenomics: the ontology-driven Phenotyping Hybrid Information System
Authors
Keywords
-
Journal
NEW PHYTOLOGIST
Volume -, Issue -, Pages -
Publisher
Wiley
Online
2018-08-30
DOI
10.1111/nph.15385
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The Physiological Basis of Drought Tolerance in Crop Plants: A Scenario-Dependent Probabilistic Approach
- (2018) François Tardieu et al. Annual Review of Plant Biology
- AgroPortal: A vocabulary and ontology repository for agronomy
- (2018) Clément Jonquet et al. COMPUTERS AND ELECTRONICS IN AGRICULTURE
- Plant genetic resources for food and agriculture: opportunities and challenges emerging from the science and information technology revolution
- (2018) Michael Halewood et al. NEW PHYTOLOGIST
- The advantages of functional phenotyping in pre-field screening for drought-tolerant crops
- (2017) Boaz Negin et al. FUNCTIONAL PLANT BIOLOGY
- InfraPhenoGrid: A scientific workflow infrastructure for plant phenomics on the Grid
- (2017) Christophe Pradal et al. Future Generation Computer Systems-The International Journal of eScience
- Integration of multi-omics techniques and physiological phenotyping within a holistic phenomics approach to study senescence in model and crop plants
- (2017) Dominik K Großkinsky et al. JOURNAL OF EXPERIMENTAL BOTANY
- The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics
- (2017) Laurel Cooper et al. NUCLEIC ACIDS RESEARCH
- Phenomics allows identification of genomic regions affecting maize stomatal conductance with conditional effects of water deficit and evaporative demand
- (2017) Santiago Alvarez Prado et al. PLANT CELL AND ENVIRONMENT
- Distinct controls of leaf widening and elongation by light and evaporative demand in maize
- (2017) Sebastien Lacube et al. PLANT CELL AND ENVIRONMENT
- A robot-assisted imaging pipeline for tracking the growths of maize ear and silks in a high-throughput phenotyping platform
- (2017) Nicolas Brichet et al. Plant Methods
- Analysis of root growth from a phenotyping data set using a density-based model
- (2016) Dimitris I. Kalogiros et al. JOURNAL OF EXPERIMENTAL BOTANY
- High-throughput phenotyping technologies allow accurate selection of stay-green
- (2016) Greg J. Rebetzke et al. JOURNAL OF EXPERIMENTAL BOTANY
- High-throughput estimation of incident light, light interception and radiation-use efficiency of thousands of plants in a phenotyping platform
- (2016) Llorenç Cabrera-Bosquet et al. NEW PHYTOLOGIST
- Pampered inside, pestered outside? Differences and similarities between plants growing in controlled conditions and in the field
- (2016) Hendrik Poorter et al. NEW PHYTOLOGIST
- Measures for interoperability of phenotypic data: minimum information requirements and formatting
- (2016) Hanna Ćwiek-Kupczyńska et al. Plant Methods
- Reduced nighttime transpiration is a relevant breeding target for high water-use efficiency in grapevine
- (2016) Aude Coupel-Ledru et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Outlier detection methods for generalized lattices: a case study on the transition from ANOVA to REML
- (2016) Angela-Maria Bernal-Vasquez et al. THEORETICAL AND APPLIED GENETICS
- PGP repository: a plant phenomics and genomics data publication infrastructure
- (2016) Daniel Arend et al. Database-The Journal of Biological Databases and Curation
- The FAIR Guiding Principles for scientific data management and stewardship
- (2016) Mark D. Wilkinson et al. Scientific Data
- Towards an open grapevine information system
- (2016) A-F Adam-Blondon et al. Horticulture Research
- The Ontology for Biomedical Investigations
- (2016) Anita Bandrowski et al. PLoS One
- Towards recommendations for metadata and data handling in plant phenotyping
- (2015) Paweł Krajewski et al. JOURNAL OF EXPERIMENTAL BOTANY
- SensorDB: a virtual laboratory for the integration, visualization and analysis of varied biological sensor data
- (2015) Ali Salehi et al. Plant Methods
- e!DAL - a framework to store, share and publish research data
- (2014) Daniel Arend et al. BMC BIOINFORMATICS
- Integrated Analysis Platform: An Open-Source Information System for High-Throughput Plant Phenotyping
- (2014) C. Klukas et al. PLANT PHYSIOLOGY
- Future Scenarios for Plant Phenotyping
- (2013) Fabio Fiorani et al. Annual Review of Plant Biology
- Recovering complete plant root system architectures from soil via X-ray μ-Computed Tomography
- (2013) Stefan Mairhofer et al. Plant Methods
- GnpIS: an information system to integrate genetic and genomic data from plants and fungi
- (2013) Delphine Steinbach et al. Database-The Journal of Biological Databases and Curation
- The statistical analysis of multi-environment data: modeling genotype-by-environment interaction and its genetic basis
- (2013) Marcos Malosetti et al. Frontiers in Physiology
- Ontologies as integrative tools for plant science
- (2012) Ramona L. Walls et al. AMERICAN JOURNAL OF BOTANY
- GROWSCREEN-Rhizo is a novel phenotyping robot enabling simultaneous measurements of root and shoot growth for plants grown in soil-filled rhizotrons
- (2012) Kerstin A. Nagel et al. FUNCTIONAL PLANT BIOLOGY
- High-throughput Phenotyping and Genomic Selection: The Frontiers of Crop Breeding ConvergeF
- (2012) Llorenç Cabrera-Bosquet et al. Journal of Integrative Plant Biology
- The Plant Ontology as a Tool for Comparative Plant Anatomy and Genomic Analyses
- (2012) Laurel Cooper et al. PLANT AND CELL PHYSIOLOGY
- Bridging the phenotypic and genetic data useful for integrated breeding through a data annotation using the Crop Ontology developed by the crop communities of practice
- (2012) Rosemary Shrestha et al. Frontiers in Physiology
- PHENOPSIS DB: an Information System for Arabidopsis thaliana phenotypic data in an environmental context
- (2011) Juliette Fabre et al. BMC PLANT BIOLOGY
- An ontology-centric architecture for extensible scientific data management systems
- (2011) Yuan-Fang Li et al. Future Generation Computer Systems-The International Journal of eScience
- Phenomics – technologies to relieve the phenotyping bottleneck
- (2011) Robert T. Furbank et al. TRENDS IN PLANT SCIENCE
- Detection and use of QTL for complex traits in multiple environments
- (2010) Fred A van Eeuwijk et al. CURRENT OPINION IN PLANT BIOLOGY
- Probing the Reproducibility of Leaf Growth and Molecular Phenotypes: A Comparison of Three Arabidopsis Accessions Cultivated in Ten Laboratories
- (2010) C. Massonnet et al. PLANT PHYSIOLOGY
- Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy
- (2009) JAN HANNEMANN et al. PLANT CELL AND ENVIRONMENT
- OpenAlea: a visual programming and component-based software platform for plant modelling
- (2008) Christophe Pradal et al. FUNCTIONAL PLANT BIOLOGY
- OWL 2: The next step for OWL
- (2008) Bernardo Cuenca Grau et al. Journal of Web Semantics
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now