Emerging roles for post-transcriptional regulation in circadian clocks

Non-optimal codon usage affects expression, structure and function of clock protein FRQ

(2013) Mian Zhou et al.   NATURE

Non-optimal codon usage is a mechanism to achieve circadian clock conditionality

(2013) Yao Xu et al.   NATURE

Nascent-Seq analysis ofDrosophilacycling gene expression

(2013) Joseph Rodriguez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ATAXIN-2 Activates PERIOD Translation to Sustain Circadian Rhythms in Drosophila

(2013) C. Lim et al.   SCIENCE

A Role for Drosophila ATX2 in Activation of PER Translation and Circadian Behavior

(2013) Y. Zhang et al.   SCIENCE

The Circadian Clock Coordinates Ribosome Biogenesis

(2013) Céline Jouffe et al.   PLOS BIOLOGY

Central and Peripheral Circadian Clocks in Mammals

(2012) Jennifer A. Mohawk et al.   Annual Review of Neuroscience

Regulation of Circadian Behavioral Output via a MicroRNA-JAK/STAT Circuit

(2012) Wenyu Luo et al.   CELL

The Oscillating miRNA 959-964 Cluster Impacts Drosophila Feeding Time and Other Circadian Outputs

(2012) Sadanand Vodala et al.   Cell Metabolism

Circadian Oscillations of Protein-Coding and Regulatory RNAs in a Highly Dynamic Mammalian Liver Epigenome

(2012) Christopher Vollmers et al.   Cell Metabolism

mRNA translation: regulating an out of soma experience

(2012) David G Wells   CURRENT OPINION IN CELL BIOLOGY

(Re)inventing the Circadian Feedback Loop

(2012) Steven A. Brown et al.   DEVELOPMENTAL CELL

Circadian control of mRNA polyadenylation dynamics regulates rhythmic protein expression

(2012) S. Kojima et al.   GENES & DEVELOPMENT

NAT1/DAP5/p97 and Atypical Translational Control in the Drosophila Circadian Oscillator

(2012) S. Bradley et al.   GENETICS

Deep sequencing the circadian and diurnal transcriptome of Drosophila brain

(2012) M. E. Hughes et al.   GENOME RESEARCH

MicroRNAs in the Pineal Gland

(2012) Samuel J. H. Clokie et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cellular Requirements for LARK in the Drosophila Circadian System

(2012) Vasudha Sundram et al.   JOURNAL OF BIOLOGICAL RHYTHMS

Protein–RNA interactions: new genomic technologies and perspectives

(2012) Julian König et al.   NATURE REVIEWS GENETICS

Circadian Rhythm-Dependent Alterations of Gene Expression in Drosophila Brain Lacking Fragile X Mental Retardation Protein

(2012) Shunliang Xu et al.   PLoS One

A Versatile Method for Cell-Specific Profiling of Translated mRNAs in Drosophila

(2012) Amanda Thomas et al.   PLoS One

Circadian changes in long noncoding RNAs in the pineal gland

(2012) S. L. Coon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cold-Inducible RNA-Binding Protein Modulates Circadian Gene Expression Posttranscriptionally

(2012) J. Morf et al.   SCIENCE

Feedback Regulation of Transcriptional Termination by the Mammalian Circadian Clock PERIOD Complex

(2012) K. Padmanabhan et al.   SCIENCE

Transcriptional Architecture and Chromatin Landscape of the Core Circadian Clock in Mammals

(2012) N. Koike et al.   SCIENCE

Speed control: cogs and gears that drive the circadian clock

(2012) Xiangzhong Zheng et al.   TRENDS IN NEUROSCIENCES

P-Bodies and Stress Granules: Possible Roles in the Control of Translation and mRNA Degradation

(2012) C. J. Decker et al.   Cold Spring Harbor Perspectives in Biology

Nascent-Seq reveals novel features of mouse circadian transcriptional regulation

(2012) Jerome S Menet et al.   eLife

Regulation of alternative splicing by the circadian clock and food related cues

(2012) Nicholas J McGlincy et al.   GENOME BIOLOGY

FMRP Stalls Ribosomal Translocation on mRNAs Linked to Synaptic Function and Autism

(2011) Jennifer C. Darnell et al.   CELL

It's time to swim! Zebrafish and the circadian clock

(2011) Gad Vatine et al.   FEBS LETTERS

Kinases and phosphatases in the mammalian circadian clock

(2011) Silke Reischl et al.   FEBS LETTERS

Drosophila CLOCK target gene characterization: implications for circadian tissue-specific gene expression

(2011) K. C. Abruzzi et al.   GENES & DEVELOPMENT

Post-transcriptional control of circadian rhythms

(2011) S. Kojima et al.   JOURNAL OF CELL SCIENCE

Rhythmic Interaction between Period1 mRNA and hnRNP Q Leads to Circadian Time-Dependent Translation

(2011) K.-H. Lee et al.   MOLECULAR AND CELLULAR BIOLOGY

The novel gene twenty-four defines a critical translational step in the Drosophila clock

(2011) Chunghun Lim et al.   NATURE

Circadian regulation of mammalian target of rapamycin signaling in the mouse suprachiasmatic nucleus

(2011) R. Cao et al.   NEUROSCIENCE

hnRNP Q mediates a phase-dependent translation-coupled mRNA decay of mouse Period3

(2011) Do-Yeon Kim et al.   NUCLEIC ACIDS RESEARCH

Expression and Rhythmic Modulation of Circulating MicroRNAs Targeting the Clock Gene Bmal1 in Mice

(2011) Vikram R. Shende et al.   PLoS One

Cell autonomy and synchrony of suprachiasmatic nucleus circadian oscillators

(2011) Jennifer A. Mohawk et al.   TRENDS IN NEUROSCIENCES

RNA-based regulation in the plant circadian clock

(2011) Dorothee Staiger et al.   TRENDS IN PLANT SCIENCE

The Mammalian Circadian Timing System: Organization and Coordination of Central and Peripheral Clocks

(2010) Charna Dibner et al.   Annual Review of Physiology

Spotlight on post-transcriptional control in the circadian system

(2010) Dorothee Staiger et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Mammalian Target of Rapamycin Signaling Modulates Photic Entrainment of the Suprachiasmatic Circadian Clock

(2010) R. Cao et al.   JOURNAL OF NEUROSCIENCE

A methyl transferase links the circadian clock to the regulation of alternative splicing

(2010) Sabrina E. Sanchez et al.   NATURE

Molecular mechanisms of eukaryotic pre-mRNA 3′ end processing regulation

(2010) Stefania Millevoi et al.   NUCLEIC ACIDS RESEARCH

hnRNP Q and PTB modulate the circadian oscillation of mouse Rev-erb α via IRES-mediated translation

(2010) Do-Yeon Kim et al.   NUCLEIC ACIDS RESEARCH

Regulation of Translation Initiation in Eukaryotes: Mechanisms and Biological Targets

(2009) Nahum Sonenberg et al.   CELL

Comprehensive analysis of microRNA-mRNA co-expression in circadian rhythm

(2009) Young-Ji Na et al.   EXPERIMENTAL AND MOLECULAR MEDICINE

The miRNA-192/194 cluster regulates the Period gene family and the circadian clock

(2009) Remco Nagel et al.   FEBS Journal

Diurnal oscillation in the accumulation ofArabidopsismicroRNAs, miR167, miR168, miR171 and miR398

(2009) Christelle Siré et al.   FEBS LETTERS

Integration of microRNA miR-122 in hepatic circadian gene expression

(2009) D. Gatfield et al.   GENES & DEVELOPMENT

A role for microRNAs in the Drosophila circadian clock

(2009) S. Kadener et al.   GENES & DEVELOPMENT

Circadian Amplitude of Cryptochrome 1 Is Modulated by mRNA Stability Regulation via Cytoplasmic hnRNP D Oscillation

(2009) K.-C. Woo et al.   MOLECULAR AND CELLULAR BIOLOGY

Dissecting differential gene expression within the circadian neuronal circuit of Drosophila

(2009) Emi Nagoshi et al.   NATURE NEUROSCIENCE

Fragile X-Related Proteins Regulate Mammalian Circadian Behavioral Rhythms

(2008) Jing Zhang et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Circadian regulation of a limited set of conserved microRNAs in Drosophila

(2008) Maocheng Yang et al.   BMC GENOMICS

Application of a Translational Profiling Approach for the Comparative Analysis of CNS Cell Types

(2008) Joseph P. Doyle et al.   CELL

A Translational Profiling Approach for the Molecular Characterization of CNS Cell Types

(2008) Myriam Heiman et al.   CELL

Sleep phenotypes of intellectual disability: A polysomnographic evaluation in subjects with Down syndrome and Fragile-X syndrome

(2008) Silvia Miano et al.   CLINICAL NEUROPHYSIOLOGY

Natural Variation in the Splice Site Strength of a Clock Gene and Species-Specific Thermal Adaptation

(2008) Kwang Huei Low et al.   NEURON

Mouse period 2 mRNA circadian oscillation is modulated by PTB–mediated rhythmic mRNA degradation

(2008) Kyung-Chul Woo et al.   NUCLEIC ACIDS RESEARCH