Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle

Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution

(2013) Jeramiah J Smith et al.   NATURE GENETICS

Rod Monochromacy and the Coevolution of Cetacean Retinal Opsins

(2013) Robert W. Meredith et al.   PLoS Genetics

Sequencing of rhesus macaque Y chromosome clarifies origins and evolution of theDAZ(Deleted in AZoospermia) genes

(2012) Jennifer F. Hughes et al.   BIOESSAYS

Triploid plover female provides support for a role of the W chromosome in avian sex determination

(2012) C. Kupper et al.   Biology Letters

Are some chromosomes particularly good at sex? Insights from amniotes

(2012) Denis O’Meally et al.   CHROMOSOME RESEARCH

How to evolve new vertebrate sex determining genes

(2012) Jennifer A. Marshall Graves   DEVELOPMENTAL DYNAMICS

Trade-off Between Selection for Dosage Compensation and Masculinization on the Avian Z Chromosome

(2012) Alison E. Wright et al.   GENETICS

The fishes of Genome 10K

(2012) Giacomo Bernardi et al.   Marine Genomics

Strict evolutionary conservation followed rapid gene loss on human and rhesus Y chromosomes

(2012) Jennifer F. Hughes et al.   NATURE

Construction of a High-Density Microsatellite Genetic Linkage Map and Mapping of Sexual and Growth-Related Traits in Half-Smooth Tongue Sole (Cynoglossus semilaevis)

(2012) Wentao Song et al.   PLoS One

W chromosome expression responds to female-specific selection

(2012) H. K. Moghadam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary transitions between mechanisms of sex determination in vertebrates

(2011) A. E. Quinn et al.   Biology Letters

The E3 ubiquitin ligase Cullin 4A regulates meiotic progression in mouse spermatogenesis

(2011) Yan Yin et al.   DEVELOPMENTAL BIOLOGY

Genome Evolution and Meiotic Maps by Massively Parallel DNA Sequencing: Spotted Gar, an Outgroup for the Teleost Genome Duplication

(2011) Angel Amores et al.   GENETICS

Induction of Mitogynogenetic Diploids and Identification of WW Super-female Using Sex-Specific SSR Markers in Half-Smooth Tongue Sole (Cynoglossus semilaevis)

(2011) Song-Lin Chen et al.   MARINE BIOTECHNOLOGY

Sex-chromosome evolution: recent progress and the influence of male and female heterogamety

(2011) Hans Ellegren   NATURE REVIEWS GENETICS

Improving RNA-Seq expression estimates by correcting for fragment bias

(2011) Adam Roberts et al.   GENOME BIOLOGY

Human RING finger protein ZNF645 is a novel testis-specific E3 ubiquitin ligase

(2010) Yun-Qiang Liu et al.   ASIAN JOURNAL OF ANDROLOGY

Sex bias and dosage compensation in the zebra finch versus chicken genomes: General and specialized patterns among birds

(2010) Y. Itoh et al.   GENOME RESEARCH

Generation and analysis of 10 000 ESTs from the half-smooth tongue soleCynoglossus semilaevisand identification of microsatellite and SNP markers

(2010) Z. Sha et al.   JOURNAL OF FISH BIOLOGY

Chimpanzee and human Y chromosomes are remarkably divergent in structure and gene content

(2010) Jennifer F. Hughes et al.   NATURE

Convergent evolution of chicken Z and human X chromosomes by expansion and gene acquisition

(2010) Daniel W. Bellott et al.   NATURE

Are homologies in vertebrate sex determination due to shared ancestry or to limited options?

(2010) Jennifer A Marshall Graves et al.   GENOME BIOLOGY

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

De novo assembly of human genomes with massively parallel short read sequencing

(2009) R. Li et al.   GENOME RESEARCH

Dosage compensation for the birds

(2009) J A Birchler   HEREDITY

Construction of Two BAC Libraries from Half-Smooth Tongue Sole Cynoglossus semilaevis and Identification of Clones Containing Candidate Sex-Determination Genes

(2009) Chang-Wei Shao et al.   MARINE BIOTECHNOLOGY

The avian Z-linked gene DMRT1 is required for male sex determination in the chicken

(2009) Craig A. Smith et al.   NATURE

The sequence and de novo assembly of the giant panda genome

(2009) Ruiqiang Li et al.   NATURE

Evolutionary Diversity and Turn-Over of Sex Determination in Teleost Fishes

(2009) J.E. Mank et al.   Sexual Development

Sex Chromosomes and the Evolution of Sexual Dimorphism: Lessons from the Genome

(2008) Judith E. Mank   AMERICAN NATURALIST

Molecular cloning, characterization and expression analysis of gonadal P450 aromatase in the half-smooth tongue-sole, Cynoglossus semilaevis

(2008) Si-Ping Deng et al.   AQUACULTURE

Genetics of crystallins: Cataract and beyond

(2008) Jochen Graw   EXPERIMENTAL EYE RESEARCH

Dosage analysis of Z chromosome genes using microarray in silkworm, Bombyx mori

(2008) Xingfu Zha et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

The evolutionary origin of flatfish asymmetry

(2008) Matt Friedman   NATURE

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH

A W-linked DM-domain gene, DM-W, participates in primary ovary development in Xenopus laevis

(2008) S. Yoshimoto et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA