Pathogens and host immunity in the ancient human oral cavity

The Surface Layer of Tannerella forsythia Contributes to Serum Resistance and Oral Bacterial Coaggregation

(2013) Naohiro Shimotahira et al.   INFECTION AND IMMUNITY

Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions

(2013) Christina J Adler et al.   NATURE GENETICS

Composition and development of oral bacterial communities

(2013) Robert J. Palmer Jr   PERIODONTOLOGY 2000

Resolution of the type material of the Asian elephant,Elephas maximusLinnaeus, 1758 (Proboscidea, Elephantidae)

(2013) Enrico Cappellini et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Microbiota and dietary interactions - an update to the hygiene hypothesis?

(2012) R. Frei et al.   ALLERGY

Multi-isotopic analysis reveals individual mobility and diet at the early iron age monumental tumulus of magdalenenberg, germany

(2012) Vicky M. Oelze et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

Management of Pharyngeal Gonorrhea Is Crucial To Prevent the Emergence and Spread of Antibiotic-Resistant Neisseria gonorrhoeae

(2012) Takashi Deguchi et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

DNA FROM HUMAN ANCIENT BACTERIA: A NOVEL SOURCE OF GENETIC EVIDENCE FROM ARCHAEOLOGICAL DENTAL CALCULUS

(2012) C. DE LA FUENTE et al.   ARCHAEOMETRY

Neutrophil extracellular traps: Is immunity the second function of chromatin?

(2012) Volker Brinkmann et al.   JOURNAL OF CELL BIOLOGY

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

The Proteomics Identifications (PRIDE) database and associated tools: status in 2013

(2012) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Porphyromonas gingivalisandEscherichia colilipopolysaccharide causes resistin release from neutrophils

(2012) R Furugen et al.   ORAL DISEASES

The blossoming of plant archaeogenetics

(2011) Sarah A. Palmer et al.   ANNALS OF ANATOMY-ANATOMISCHER ANZEIGER

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

(2011) Suparna Mitra et al.   BMC BIOINFORMATICS

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

(2011) Nabil-Fareed Alikhan et al.   BMC GENOMICS

PATRIC: the Comprehensive Bacterial Bioinformatics Resource with a Focus on Human Pathogenic Species

(2011) Joseph J. Gillespie et al.   INFECTION AND IMMUNITY

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Antibiotic resistance is ancient

(2011) Vanessa M. D’Costa et al.   NATURE

Bayesian community-wide culture-independent microbial source tracking

(2011) Dan Knights et al.   NATURE METHODS

Cardiovascular disease and the role of oral bacteria

(2011) Shaneen J. Leishman et al.   Journal of Oral Microbiology

Fat bodies and thin bodies. Cultural, biomedical and market discourses on obesity

(2010) Mabel Gracia-Arnaiz   APPETITE

Early Neolithic diet and animal husbandry: stable isotope evidence from three Linearbandkeramik (LBK) sites in Central Germany

(2010) Vicky M. Oelze et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

The Human Oral Microbiome

(2010) F. E. Dewhirst et al.   JOURNAL OF BACTERIOLOGY

H-Score, a Mass Accuracy Driven Rescoring Approach for Improved Peptide Identification in Modification Rich Samples

(2010) Mikhail M Savitski et al.   JOURNAL OF PROTEOME RESEARCH

Community and gene composition of a human dental plaque microbiota obtained by metagenomic sequencing

(2010) G. Xie et al.   Molecular Oral Microbiology

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

(2010) D. Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Comparison of neutrophil functions in aggressive and chronic periodontitis

(2010) Mark I. Ryder   PERIODONTOLOGY 2000

Virulence mechanisms of Tannerella forsythia

(2010) Ashu Sharma   PERIODONTOLOGY 2000

Oral Biofilm Architecture on Natural Teeth

(2010) Vincent Zijnge et al.   PLoS One

Genome Sequencing Reveals Widespread Virulence Gene Exchange among Human Neisseria Species

(2010) Pradeep Reddy Marri et al.   PLoS One

Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity

(2010) D. Willner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microfossils in calculus demonstrate consumption of plants and cooked foods in Neanderthal diets (Shanidar III, Iraq; Spy I and II, Belgium)

(2010) A. G. Henry et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information

(2010) T. Chen et al.   Database-The Journal of Biological Databases and Curation

Complete genome sequence of Olsenella uli type strain (VPI D76D-27CT)

(2010) Markus Göker et al.   Standards in Genomic Sciences

Infernal 1.0: inference of RNA alignments

(2009) E. P. Nawrocki et al.   BIOINFORMATICS

Dietary Carbohydrates and Dental-Systemic Diseases

(2009) P. Hujoel   JOURNAL OF DENTAL RESEARCH

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

Antimicrobial peptides of the oral cavity

(2009) Sven-Ulrik Gorr   PERIODONTOLOGY 2000

Functional Characterization of the Antibiotic Resistance Reservoir in the Human Microflora

(2009) M. O. A. Sommer et al.   SCIENCE

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Starch granules, dental calculus and new perspectives on ancient diet

(2008) Karen Hardy et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

ARDB--Antibiotic Resistance Genes Database

(2008) B. Liu et al.   NUCLEIC ACIDS RESEARCH

Detection of oral bacteria in cardiovascular specimens

(2008) K. Nakano et al.   Oral microbiology and immunology

Associations between periodontal diseases and systemic diseases: A review of the inter-relationships and interactions with diabetes, respiratory diseases, cardiovascular diseases and osteoporosis

(2007) Lan-Chen Kuo et al.   PUBLIC HEALTH