Efficient proximity labeling in living cells and organisms with TurboID

RNA–protein interaction detection in living cells

(2018) Muthukumar Ramanathan et al.   NATURE METHODS

CP39, CP75 and CP91 are major structural components of the Dictyostelium centrosome’s core structure

(2017) Irene Meyer et al.   EUROPEAN JOURNAL OF CELL BIOLOGY

Capturing the Asc1p/Receptor forActivatedC Kinase1(RACK1) Microenvironment at the Head Region of the 40S Ribosome with Quantitative BioID in Yeast

(2017) Nadine Opitz et al.   MOLECULAR & CELLULAR PROTEOMICS

VRK2A is an A-type lamin–dependent nuclear envelope kinase that phosphorylates BAF

(2017) Birendra KC et al.   MOLECULAR BIOLOGY OF THE CELL

Arid1b haploinsufficiency disrupts cortical interneuron development and mouse behavior

(2017) Eui-Man Jung et al.   NATURE NEUROSCIENCE

A subcellular map of the human proteome

(2017) Peter J. Thul et al.   SCIENCE

Identification of microsporidia host-exposed proteins reveals a repertoire of rapidly evolving proteins

(2017) Aaron W. Reinke et al.   Nature Communications

Calmodulin-like proteins localized to the conoid regulate motility and cell invasion by Toxoplasma gondii

(2017) Shaojun Long et al.   PLoS Pathogens

Live-cell mapping of organelle-associated RNAs via proximity biotinylation combined with protein-RNA crosslinking

(2017) Pornchai Kaewsapsak et al.   eLife

Proteomic mapping of cytosol-facing outer mitochondrial and ER membranes in living human cells by proximity biotinylation

(2017) Victoria Hung et al.   eLife

The human cytoplasmic dynein interactome reveals novel activators of motility

(2017) William B Redwine et al.   eLife

Screening of Proximal and Interacting Proteins in Rice Protoplasts by Proximity-Dependent Biotinylation

(2017) Qiupeng Lin et al.   Frontiers in Plant Science

In vivo mapping of tissue- and subcellular-specific proteomes in Caenorhabditis elegans

(2017) Aaron W. Reinke et al.   Science Advances

Novel insights into the composition and function of the Toxoplasma IMC sutures

(2016) Allan L. Chen et al.   CELLULAR MICROBIOLOGY

An EF-hand-containing Protein inTrypanosoma bruceiRegulates Cytokinesis Initiation by Maintaining the Stability of the Cytokinesis Initiation Factor CIF1

(2016) Qing Zhou et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Proteomic Analysis of thePlasmodium bergheiGametocyte Egressome and Vesicular bioID of Osmiophilic Body Proteins Identifies Merozoite TRAP-like Protein (MTRAP) as an Essential Factor for Parasite Transmission

(2016) Jessica Kehrer et al.   MOLECULAR & CELLULAR PROTEOMICS

An improved smaller biotin ligase for BioID proximity labeling

(2016) Dae In Kim et al.   MOLECULAR BIOLOGY OF THE CELL

A split horseradish peroxidase for the detection of intercellular protein–protein interactions and sensitive visualization of synapses

(2016) Jeffrey D Martell et al.   NATURE BIOTECHNOLOGY

Spatially resolved proteomic mapping in living cells with the engineered peroxidase APEX2

(2016) Victoria Hung et al.   Nature Protocols

UniProt: the universal protein knowledgebase

(2016)   NUCLEIC ACIDS RESEARCH

Identification of an elaborate complex mediating postsynaptic inhibition

(2016) A. Uezu et al.   SCIENCE

Filling the Void: Proximity-Based Labeling of Proteins in Living Cells

(2016) Dae In Kim et al.   TRENDS IN CELL BIOLOGY

In Vivo Biotinylation of the Toxoplasma Parasitophorous Vacuole Reveals Novel Dense Granule Proteins Important for Parasite Growth and Pathogenesis

(2016) Santhosh M. Nadipuram et al.   mBio

Src1 is a Protein of the Inner Nuclear Membrane Interacting with the Dictyostelium Lamin NE81

(2016) Petros Batsios et al.   Cells

A Dynamic Protein Interaction Landscape of the Human Centrosome-Cilium Interface

(2015) Gagan D. Gupta et al.   CELL

The Transgenic RNAi Project at Harvard Medical School: Resources and Validation

(2015) L. A. Perkins et al.   GENETICS

Allosteric Coupling via Distant Disorder-to-Order Transitions

(2015) Christopher Eginton et al.   JOURNAL OF MOLECULAR BIOLOGY

BioID identifies novel c-MYC interacting partners in cultured cells and xenograft tumors

(2015) Dharmendra Dingar et al.   Journal of Proteomics

MitoCarta2.0: an updated inventory of mammalian mitochondrial proteins

(2015) Sarah E. Calvo et al.   NUCLEIC ACIDS RESEARCH

Proteomic mapping in liveDrosophilatissues using an engineered ascorbate peroxidase

(2015) Chiao-Lin Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Response to Comment on "Principles of ER cotranslational translocation revealed by proximity-specific ribosome profiling"

(2015) C. H. Jan et al.   SCIENCE

Phosphorylation of a Myosin Motor by TgCDPK3 Facilitates Rapid Initiation of Motility during Toxoplasma gondii egress

(2015) Rajshekhar Y. Gaji et al.   PLoS Pathogens

Directed evolution of APEX2 for electron microscopy and proximity labeling

(2014) Stephanie S Lam et al.   NATURE METHODS

Gene Ontology Consortium: going forward

(2014)   NUCLEIC ACIDS RESEARCH

Probing nuclear pore complex architecture with proximity-dependent biotinylation

(2014) D. I. Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Proteomic Mapping of Mitochondria in Living Cells via Spatially Restricted Enzymatic Tagging

(2013) H.-W. Rhee et al.   SCIENCE

Novel Bilobe Components in Trypanosoma brucei Identified Using Proximity-Dependent Biotinylation

(2012) Brooke Morriswood et al.   EUKARYOTIC CELL

A promiscuous biotin ligase fusion protein identifies proximal and interacting proteins in mammalian cells

(2012) Kyle J. Roux et al.   JOURNAL OF CELL BIOLOGY

Engineered ascorbate peroxidase as a genetically encoded reporter for electron microscopy

(2012) Jeffrey D Martell et al.   NATURE BIOTECHNOLOGY

Biotin Starvation with Adequate Glucose Provision Causes Paradoxical Changes in Fuel Metabolism Gene Expression Similar in Rat (Rattus norvegicus), Nematode (Caenorhabditis elegans) and Yeast (Saccharomyces cerevisiae)

(2010) D. Ortega-Cuellar et al.   Journal of Nutrigenetics and Nutrigenomics

A Mitochondrial Protein Compendium Elucidates Complex I Disease Biology

(2008) David J. Pagliarini et al.   CELL

Exploiting position effects and the gypsy retrovirus insulator to engineer precisely expressed transgenes

(2008) Michele Markstein et al.   NATURE GENETICS

A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome

(2008) M. Sultan et al.   SCIENCE

Promiscuous protein biotinylation by Escherichia coli biotin protein ligase

(2004) Eunjoo Choi-Rhee et al.   PROTEIN SCIENCE