Massively parallel functional annotation of 3′ untranslated regions
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Massively parallel functional annotation of 3′ untranslated regions
Authors
Keywords
-
Journal
NATURE BIOTECHNOLOGY
Volume 32, Issue 4, Pages 387-391
Publisher
Springer Nature
Online
2014-03-17
DOI
10.1038/nbt.2851
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Roquin Promotes Constitutive mRNA Decay via a Conserved Class of Stem-Loop Recognition Motifs
- (2013) Kathrin Leppek et al. CELL
- Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression
- (2013) S. Lianoglou et al. GENES & DEVELOPMENT
- 3' UTR-isoform choice has limited influence on the stability and translational efficiency of most mRNAs in mouse fibroblasts
- (2013) N. Spies et al. GENOME RESEARCH
- A compendium of RNA-binding motifs for decoding gene regulation
- (2013) Debashish Ray et al. NATURE
- All SNPs Are Not Created Equal: Genome-Wide Association Studies Reveal a Consistent Pattern of Enrichment among Functionally Annotated SNPs
- (2013) Andrew J. Schork et al. PLoS Genetics
- Systematic discovery of structural elements governing stability of mammalian messenger RNAs
- (2012) Hani Goodarzi et al. NATURE
- Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay
- (2012) Alexandre Melnikov et al. NATURE BIOTECHNOLOGY
- Massively parallel functional dissection of mammalian enhancers in vivo
- (2012) Rupali P Patwardhan et al. NATURE BIOTECHNOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- miRNA-Mediated Gene Silencing by Translational Repression Followed by mRNA Deadenylation and Decay
- (2012) S. Djuranovic et al. SCIENCE
- Ribosome Profiling Shows That miR-430 Reduces Translation Before Causing mRNA Decay in Zebrafish
- (2012) A. A. Bazzini et al. SCIENCE
- DREME: motif discovery in transcription factor ChIP-seq data
- (2011) Timothy L. Bailey BIOINFORMATICS
- FIMO: scanning for occurrences of a given motif
- (2011) Charles E. Grant et al. BIOINFORMATICS
- Weak seed-pairing stability and high target-site abundance decrease the proficiency of lsy-6 and other microRNAs
- (2011) David M Garcia et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Transcriptome-wide Identification of RNA-Binding Protein and MicroRNA Target Sites by PAR-CLIP
- (2010) Markus Hafner et al. CELL
- Mammalian microRNAs predominantly act to decrease target mRNA levels
- (2010) Huili Guo et al. NATURE
- Desperately seeking microRNA targets
- (2010) Marshall Thomas et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- MicroRNAs: Target Recognition and Regulatory Functions
- (2009) David P. Bartel CELL
- Widespread Shortening of 3′UTRs by Alternative Cleavage and Polyadenylation Activates Oncogenes in Cancer Cells
- (2009) Christine Mayr et al. CELL
- High-resolution analysis of DNA regulatory elements by synthetic saturation mutagenesis
- (2009) Rupali P Patwardhan et al. NATURE BIOTECHNOLOGY
- Database for mRNA Half-Life of 19 977 Genes Obtained by DNA Microarray Analysis of Pluripotent and Differentiating Mouse Embryonic Stem Cells
- (2008) L. V. Sharova et al. DNA RESEARCH
- Ribonomic Analysis of Human Pum1 Reveals cis-trans Conservation across Species despite Evolution of Diverse mRNA Target Sets
- (2008) A. R. Morris et al. MOLECULAR AND CELLULAR BIOLOGY
- Comparative Analysis of mRNA Targets for Human PUF-Family Proteins Suggests Extensive Interaction with the miRNA Regulatory System
- (2008) Alessia Galgano et al. PLoS One
- Proliferating Cells Express mRNAs with Shortened 3' Untranslated Regions and Fewer MicroRNA Target Sites
- (2008) R. Sandberg et al. SCIENCE
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now