Comparative analyses of C4 and C3 photosynthesis in developing leaves of maize and rice

Climate Change Impacts on Global Food Security

(2013) T. Wheeler et al.   SCIENCE

Plant Nitrogen Assimilation and Use Efficiency

(2012) Guohua Xu et al.   Annual Review of Plant Biology

Photorespiration and the Evolution of C4Photosynthesis

(2012) Rowan F. Sage et al.   Annual Review of Plant Biology

BBH-LS: an algorithm for computing positional homologs using sequence and gene context similarity

(2012) Melvin Zhang et al.   BMC Systems Biology

Engineering C4 photosynthetic regulatory networks

(2012) Sarit Weissmann et al.   CURRENT OPINION IN BIOTECHNOLOGY

Differential analysis of gene regulation at transcript resolution with RNA-seq

(2012) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

The identification of cutin synthase: formation of the plant polyester cutin

(2012) Trevor H Yeats et al.   Nature Chemical Biology

Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis

(2012) Fumio Matsuda et al.   PLANT JOURNAL

Characterizing Regulatory and Functional Differentiation between Maize Mesophyll and Bundle Sheath Cells by Transcriptomic Analysis

(2012) Y.-M. Chang et al.   PLANT PHYSIOLOGY

Casparian strip diffusion barrier in Arabidopsis is made of a lignin polymer without suberin

(2012) S. Naseer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Development of C4 Rice: Current Progress and Future Challenges

(2012) S. von Caemmerer et al.   SCIENCE

The grass leaf developmental gradient as a platform for a systems understanding of the anatomical specialization of C4 leaves

(2011) T. Nelson   JOURNAL OF EXPERIMENTAL BOTANY

Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function

(2011) Takayuki Tohge et al.   Nature Protocols

Regulatory mechanisms underlying C4 photosynthesis

(2011) Lin Wang et al.   NEW PHYTOLOGIST

Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C4 Model and Provides Candidates for Regulation

(2011) T. R. Pick et al.   PLANT CELL

Multiple Arabidopsis genes primed for recruitment into C4 photosynthesis

(2011) Kaisa Kajala et al.   PLANT JOURNAL

Toward the Storage Metabolome: Profiling the Barley Vacuole

(2011) T. Tohge et al.   PLANT PHYSIOLOGY

A Low-Cost Library Construction Protocol and Data Analysis Pipeline for Illumina-Based Strand-Specific Multiplex RNA-Seq

(2011) Lin Wang et al.   PLoS One

Global food demand and the sustainable intensification of agriculture

(2011) D. Tilman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Regulation of Gene Expression Required for C4Photosynthesis

(2010) Julian M. Hibberd et al.   Annual Review of Plant Biology

WebGestalt2: an updated and expanded version of the Web-based Gene Set Analysis Toolkit

(2010) Dexter Duncan et al.   BMC BIOINFORMATICS

Metabolic and Signaling Aspects Underpinning the Regulation of Plant Carbon Nitrogen Interactions

(2010) Adriano Nunes-Nesi et al.   Molecular Plant

The developmental dynamics of the maize leaf transcriptome

(2010) Pinghua Li et al.   NATURE GENETICS

Network Analysis of Enzyme Activities and Metabolite Levels and Their Relationship to Biomass in a Large Panel of Arabidopsis Accessions

(2010) R. Sulpice et al.   PLANT CELL

Overexpression of the Epidermis-Specific Homeodomain-Leucine Zipper IV Transcription Factor OUTER CELL LAYER1 in Maize Identifies Target Genes Involved in Lipid Metabolism and Cuticle Biosynthesis

(2010) Marie Javelle et al.   PLANT PHYSIOLOGY

Suberin research in the genomics era—New interest for an old polymer

(2010) Kosala Ranathunge et al.   PLANT SCIENCE

Assessment of Microbial Communities by Graph Partitioning in a Study of Soil Fungi in Two Alpine Meadows

(2009) L. Zinger et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Functional and chemical comparison of apoplastic barriers to radial oxygen loss in roots of rice (Oryza sativa L.) grown in aerated or deoxygenated solution

(2009) Lukasz Kotula et al.   JOURNAL OF EXPERIMENTAL BOTANY

InParanoid 7: new algorithms and tools for eukaryotic orthology analysis

(2009) G. Ostlund et al.   NUCLEIC ACIDS RESEARCH

Web-based resources for mass-spectrometry-based metabolomics: A user’s guide

(2009) Takayuki Tohge et al.   PHYTOCHEMISTRY

MYB58 and MYB63 Are Transcriptional Activators of the Lignin Biosynthetic Pathway during Secondary Cell Wall Formation in Arabidopsis

(2009) J. Zhou et al.   PLANT CELL

Cutin deficiency in the tomato fruit cuticle consistently affects resistance to microbial infection and biomechanical properties, but not transpirational water loss

(2009) Tal Isaacson et al.   PLANT JOURNAL

Identification of an Arabidopsis Feruloyl-Coenzyme A Transferase Required for Suberin Synthesis

(2009) I. Molina et al.   PLANT PHYSIOLOGY

CYP86B1 Is Required for Very Long Chain  -Hydroxyacid and  , -Dicarboxylic Acid Synthesis in Root and Seed Suberin Polyester

(2009) V. Compagnon et al.   PLANT PHYSIOLOGY

Unraveling Transcriptional Control in Arabidopsis Using cis-Regulatory Elements and Coexpression Networks

(2009) K. Vandepoele et al.   PLANT PHYSIOLOGY

Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis

(2009) A. Mustroph et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A hydroxycinnamoyltransferase responsible for synthesizing suberin aromatics in Arabidopsis

(2009) J.-Y. Gou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rising atmospheric carbon dioxide concentration and the future of C4 crops for food and fuel

(2009) A. D.B. Leakey   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The B73 Maize Genome: Complexity, Diversity, and Dynamics

(2009) P. S. Schnable et al.   SCIENCE

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

A Battery of Transcription Factors Involved in the Regulation of Secondary Cell Wall Biosynthesis in Arabidopsis

(2008) R. Zhong et al.   PLANT CELL

How to usefully compare homologous plant genes and chromosomes as DNA sequences

(2008) Eric Lyons et al.   PLANT JOURNAL

GRASSIUS: A Platform for Comparative Regulatory Genomics across the Grasses

(2008) A. Yilmaz et al.   PLANT PHYSIOLOGY