A large synthetic peptide and phosphopeptide reference library for mass spectrometry–based proteomics
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
A large synthetic peptide and phosphopeptide reference library for mass spectrometry–based proteomics
Authors
Keywords
-
Journal
NATURE BIOTECHNOLOGY
Volume 31, Issue 6, Pages 557-564
Publisher
Springer Nature
Online
2013-05-20
DOI
10.1038/nbt.2585
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Robust phosphoproteome enrichment using monodisperse microsphere–based immobilized titanium (IV) ion affinity chromatography
- (2013) Houjiang Zhou et al. Nature Protocols
- Modification Site Localization Scoring: Strategies and Performance
- (2012) Robert J. Chalkley et al. MOLECULAR & CELLULAR PROTEOMICS
- Chromatographic retention time prediction for posttranslationally modified peptides
- (2012) Luminita Moruz et al. PROTEOMICS
- Phosphorylation site localization in peptides by MALDI MS/MS and the Mascot Delta Score
- (2011) Simone Lemeer et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- Pinpointing Phosphorylation Sites: Quantitative Filtering and a Novel Site-specific x-Ion Fragment
- (2011) Christian D. Kelstrup et al. JOURNAL OF PROTEOME RESEARCH
- Universal and Confident Phosphorylation Site Localization Using phosphoRS
- (2011) Thomas Taus et al. JOURNAL OF PROTEOME RESEARCH
- Improved Peptide Identification by Targeted Fragmentation Using CID, HCD and ETD on an LTQ-Orbitrap Velos
- (2011) Christian K. Frese et al. JOURNAL OF PROTEOME RESEARCH
- Modification Site Localization Scoring Integrated into a Search Engine
- (2011) Peter R. Baker et al. MOLECULAR & CELLULAR PROTEOMICS
- iProphet: Multi-level Integrative Analysis of Shotgun Proteomic Data Improves Peptide and Protein Identification Rates and Error Estimates
- (2011) David Shteynberg et al. MOLECULAR & CELLULAR PROTEOMICS
- Evaluation of HCD- and CID-type Fragmentation Within Their Respective Detection Platforms For Murine Phosphoproteomics
- (2011) Mark P. Jedrychowski et al. MOLECULAR & CELLULAR PROTEOMICS
- Spectral archives: extending spectral libraries to analyze both identified and unidentified spectra
- (2011) Ari M Frank et al. NATURE METHODS
- Combinatorial Libraries of Synthetic Peptides as a Model for Shotgun Proteomics
- (2010) Brian C. Bohrer et al. ANALYTICAL CHEMISTRY
- Training, Selection, and Robust Calibration of Retention Time Models for Targeted Proteomics
- (2010) Luminita Moruz et al. JOURNAL OF PROTEOME RESEARCH
- Feasibility of Large-Scale Phosphoproteomics with Higher Energy Collisional Dissociation Fragmentation
- (2010) Nagarjuna Nagaraj et al. JOURNAL OF PROTEOME RESEARCH
- Confident Phosphorylation Site Localization Using the Mascot Delta Score
- (2010) Mikhail M. Savitski et al. MOLECULAR & CELLULAR PROTEOMICS
- Proteomics: a pragmatic perspective
- (2010) Parag Mallick et al. NATURE BIOTECHNOLOGY
- Quantitative Phosphoproteomics Reveals Widespread Full Phosphorylation Site Occupancy During Mitosis
- (2010) J. V. Olsen et al. Science Signaling
- Peptide Retention Standards and Hydrophobicity Indexes in Reversed-Phase High-Performance Liquid Chromatography of Peptides
- (2009) Oleg V. Krokhin et al. ANALYTICAL CHEMISTRY
- The phosphoproteomics data explosion
- (2009) Simone Lemeer et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Phosphopeptide fragmentation and analysis by mass spectrometry
- (2009) Paul J. Boersema et al. JOURNAL OF MASS SPECTROMETRY
- Mascot-Derived False Positive Peptide Identifications Revealed by Manual Analysis of Tandem Mass Spectra
- (2009) Yue Chen et al. JOURNAL OF PROTEOME RESEARCH
- SLoMo: Automated Site Localization of Modifications from ETD/ECD Mass Spectra
- (2009) Christopher M. Bailey et al. JOURNAL OF PROTEOME RESEARCH
- Large-scale Proteomics Analysis of the Human Kinome
- (2009) Felix S. Oppermann et al. MOLECULAR & CELLULAR PROTEOMICS
- Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry
- (2009) D. L. Swaney et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Analytical strategies for phosphoproteomics
- (2009) Tine E. Thingholm et al. PROTEOMICS
- The detection, correlation, and comparison of peptide precursor and product ions from data independent LC-MS with data dependant LC-MS/MS
- (2009) Scott J. Geromanos et al. PROTEOMICS
- Kinase-Selective Enrichment Enables Quantitative Phosphoproteomics of the Kinome across the Cell Cycle
- (2008) Henrik Daub et al. MOLECULAR CELL
- Decision tree–driven tandem mass spectrometry for shotgun proteomics
- (2008) Danielle L Swaney et al. NATURE METHODS
- A Data-Mining Scheme for Identifying Peptide Structural Motifs Responsible for Different MS/MS Fragmentation Intensity Patterns
- (2007) Yingying Huang et al. JOURNAL OF PROTEOME RESEARCH
- The Standard Protein Mix Database: A Diverse Data Set To Assist in the Production of Improved Peptide and Protein Identification Software Tools
- (2007) John Klimek et al. JOURNAL OF PROTEOME RESEARCH
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started