Inherent bacterial DNA contamination of extraction and sequencing reagents may affect interpretation of microbiota in low bacterial biomass samples

Leaky gut – concept or clinical entity?

(2016) Eamonn M.M. Quigley   CURRENT OPINION IN GASTROENTEROLOGY

Changes in 16s RNA Gene Microbial Community Profiling by Concentration of Prokaryotic DNA

(2015) Angela Glassing et al.   JOURNAL OF MICROBIOLOGICAL METHODS

16S rRNA gene-based profiling of the human infant gut microbiota is strongly influenced by sample processing and PCR primer choice

(2015) Alan W. Walker et al.   Microbiome

Deriving accurate microbiota profiles from human samples with low bacterial content through post-sequencing processing of Illumina MiSeq data

(2015) Jake Jervis-Bardy et al.   Microbiome

Leprous lesion presents enrichment of opportunistic pathogenic bacteria

(2015) Paulo E. S. Silva et al.   SpringerPlus

Microbial Population Differentials between Mucosal and Submucosal Intestinal Tissues in Advanced Crohn's Disease of the Ileum

(2015) Rodrick J. Chiodini et al.   PLoS One

The Characterization of Novel Tissue Microbiota Using an Optimized 16S Metagenomic Sequencing Pipeline

(2015) Jérôme Lluch et al.   PLoS One

Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

(2014) Susannah J Salter et al.   BMC BIOLOGY

Microbial Dysbiosis Is Associated with Human Breast Cancer

(2014) Caiyun Xuan et al.   PLoS One

Metagenome and metabolism: the tissue microbiota hypothesis

(2013) Rémy Burcelin et al.   DIABETES OBESITY & METABOLISM

Crohn’s Disease May Be Differentiated Into 2 Distinct Biotypes Based on the Detection of Bacterial Genomic Sequences and Virulence Genes Within Submucosal Tissues

(2013) Rodrick J. Chiodini et al.   JOURNAL OF CLINICAL GASTROENTEROLOGY

Sequence-Based Discovery of Bradyrhizobium enterica in Cord Colitis Syndrome

(2013) Ami S. Bhatt et al.   NEW ENGLAND JOURNAL OF MEDICINE

Evaluation of an ethidium monoazide-enhanced 16S rDNA real-time polymerase chain reaction assay for bacterial screening of platelet concentrates and comparison with automated culture

(2013) Jeremy A. Garson et al.   TRANSFUSION

Crohn’s disease and the mycobacterioses: A quarter century later. Causation or simple association?

(2012) Rodrick J. Chiodini et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Multiple Sources of Contamination in Samples from Patients Reported to Have XMRV Infection

(2012) Mary F. Kearney et al.   PLoS One

Development of an ethidium monoazide-enhanced internally controlled universal 16S rDNA real-time polymerase chain reaction assay for detection of bacterial contamination in platelet concentrates

(2011) Poorvi Patel et al.   TRANSFUSION