Evolutionary basis of mitonuclear discordance between sister species of mole salamanders (Ambystomasp.)

MIGRATION, MITOCHONDRIA, AND THE YELLOW-RUMPED WARBLER

(2013) David P. L. Toews et al.   EVOLUTION

Model selection as a tool for phylogeographic inference: an example from the willowSalix melanopsis

(2013) Bryan C. Carstens et al.   MOLECULAR ECOLOGY

No evidence for nuclear introgression despite complete mtDNA replacement in the Carpathian newt (Lissotriton montandoni)

(2013) P. Zieliński et al.   MOLECULAR ECOLOGY

Genetic introgression and hybridization in Antillean freshwater turtles (Trachemys) revealed by coalescent analyses of mitochondrial and cloned nuclear markers

(2013) James F. Parham et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

(2012) R. Peakall et al.   BIOINFORMATICS

SPECIES DELIMITATION WITH ABC AND OTHER COALESCENT-BASED METHODS: A TEST OF ACCURACY WITH SIMULATIONS AND AN EMPIRICAL EXAMPLE WITH LIZARDS OF THE LIOLAEMUS DARWINII COMPLEX (SQUAMATA: LIOLAEMIDAE)

(2012) Arley Camargo et al.   EVOLUTION

Discordant Patterns of Nuclear and Mitochondrial Introgression in Iberian Populations of the European Common Frog (Rana temporaria)

(2012) Michael Veith et al.   JOURNAL OF HEREDITY

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evaluating the ability of Bayesian clustering methods to detect hybridization and introgression using an empirical red wolf data set

(2012) Justin H. Bohling et al.   MOLECULAR ECOLOGY

The biogeography of mitochondrial and nuclear discordance in animals

(2012) DAVID P. L. TOEWS et al.   MOLECULAR ECOLOGY

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Genetic evidence of contemporary hybridization in one of North America's rarest anurans, the Florida bog frog

(2011) J. D. Austin et al.   ANIMAL CONSERVATION

Hybridization and massive mtDNA unidirectional introgression between the closely related Neotropical toads Rhinella marina and R. schneideriinferred from mtDNA and nuclear markers

(2011) Fernando Sequeira et al.   BMC EVOLUTIONARY BIOLOGY

Repeated Unidirectional Introgression of Nuclear and Mitochondrial DNA Between Four Congeneric Tanganyikan Cichlids

(2011) Bruno Nevado et al.   MOLECULAR BIOLOGY AND EVOLUTION

Hybrid origin of Audubon’s warbler

(2011) ALAN BRELSFORD et al.   MOLECULAR ECOLOGY

A single nucleotide polymorphism assay for the identification of unisexual Ambystoma Salamanders

(2011) KATHERINE R. GREENWALD et al.   Molecular Ecology Resources

Inferring Species-Level Phylogenies and Taxonomic Distinctiveness Using Multilocus Data in Sistrurus Rattlesnakes

(2011) Laura S. Kubatko et al.   SYSTEMATIC BIOLOGY

Recurrent Introgression of Mitochondrial DNA Among Hares (Lepus spp.) Revealed by Species-Tree Inference and Coalescent Simulations

(2011) J. Melo-Ferreira et al.   SYSTEMATIC BIOLOGY

BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis

(2010) Bret R. Larget et al.   BIOINFORMATICS

Genetic identity of endangered massasauga rattlesnakes (Sistrurus sp.) in Missouri

(2010) H. Lisle Gibbs et al.   CONSERVATION GENETICS

Unified Framework to Evaluate Panmixia and Migration Direction Among Multiple Sampling Locations

(2010) P. Beerli et al.   GENETICS

Widespread introgression does not leak into allotopy in a broad sympatric zone

(2010) A Johanet et al.   HEREDITY

Patterns of differential introgression in a salamander hybrid zone: inferences from genetic data and ecological niche modelling

(2010) M. W. H. CHATFIELD et al.   MOLECULAR ECOLOGY

Linking the mitochondrial genotype to the organismal phenotype

(2010) J. W. O. BALLARD et al.   MOLECULAR ECOLOGY

Rapid spread of invasive genes into a threatened native species

(2010) Benjamin M. Fitzpatrick et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Approximate Bayesian Computation (ABC) in practice

(2010) Katalin Csilléry et al.   TRENDS IN ECOLOGY & EVOLUTION

Intraspecific Variation in Life History Traits among Two Forms of Ambystoma barbouri Larvae

(2009) Matthew D. Venesky et al.   AMERICAN MIDLAND NATURALIST

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Genetic analysis of hybridization and introgression between wild mongoose and brown lemurs

(2009) Jennifer Pastorini et al.   BMC EVOLUTIONARY BIOLOGY

An examination of intergenomic exchanges in A. laterale-dependent unisexual salamanders in the genus Ambystoma

(2009) K. Bi et al.   CYTOGENETIC AND GENOME RESEARCH

DURATION AND CONSISTENCY OF HISTORICAL SELECTION ARE CORRELATED WITH ADAPTIVE TRAIT EVOLUTION IN THE STREAMSIDE SALAMANDER,AMBYSTOMA BARBOURI

(2009) Jonathan M. Eastman et al.   EVOLUTION

MORPHOLOGICAL AND MOLECULAR EVIDENCE REVEALS RECENT HYBRIDIZATION BETWEEN GORILLA TAXA

(2009) Rebecca Rogers Ackermann et al.   EVOLUTION

Sex in unisexual salamanders: discovery of a new sperm donor with ancient affinities

(2009) J P Bogart et al.   HEREDITY

How Robust Are "Isolation with Migration" Analyses to Violations of the IM Model? A Simulation Study

(2009) J. L. Strasburg et al.   MOLECULAR BIOLOGY AND EVOLUTION

Bayesian Inference of Species Trees from Multilocus Data

(2009) J. Heled et al.   MOLECULAR BIOLOGY AND EVOLUTION

Frequent mitochondrial gene introgression among high elevation Tibetan megophryid frogs revealed by conflicting gene genealogies

(2009) WEI CHEN et al.   MOLECULAR ECOLOGY

The genomic legacy from the extinctLepus timidusto the three hare species of Iberia: contrast between mtDNA, sex chromosomes and autosomes

(2009) J. MELO-FERREIRA et al.   MOLECULAR ECOLOGY

Inferring weak population structure with the assistance of sample group information

(2009) MELISSA J. HUBISZ et al.   Molecular Ecology Resources

Invasive hybrid tiger salamander genotypes impact native amphibians

(2009) M. E. Ryan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Identifying Hybridization Events in the Presence of Coalescence via Model Selection

(2009) Laura Salter Kubatko   SYSTEMATIC BIOLOGY

Conflicting Mitochondrial and Nuclear Phylogenies for the Widely Disjunct Emys (Testudines: Emydidae) Species Complex, and What They Tell Us about Biogeography and Hybridization

(2009) Phillip Q. Spinks et al.   SYSTEMATIC BIOLOGY

Gene Trees Reveal Repeated Instances of Mitochondrial DNA Introgression in Orangethroat Darters (Percidae: Etheostoma)

(2009) Christen M. Bossu et al.   SYSTEMATIC BIOLOGY

Gene flow and species delimitation

(2009) Rémy J. Petit et al.   TRENDS IN ECOLOGY & EVOLUTION

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

Widespread mito-nuclear discordance with evidence for introgressive hybridization and selective sweeps inLycaeides

(2008) ZACHARIAH GOMPERT et al.   MOLECULAR ECOLOGY

genepop’007: a complete re-implementation of the genepop software for Windows and Linux

(2007) FRANÇOIS ROUSSET   Molecular Ecology Resources