Genetic Introgression: An Integral but neglected component of speciation in birds

Using Historical DNA to Characterize Hybridization Between Baltimore Orioles (Icterus galbula) and Bullock’s Orioles (I. bullockii)

(2011) Matthew D. Carling et al.   AUK

Genetic Applications in Avian Conservation

(2011) Susan M. Haig et al.   AUK

A cryptic contact zone between divergent mitochondrial DNA lineages in southwestern North America supports past introgressive hybridization in the yellow-rumped warbler complex (Aves: Dendroica coronata)

(2011) BORJA MILÁ et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Spatio-temporal changes in the genetic structure of the Passerina bunting hybrid zone

(2011) MATTHEW D. CARLING et al.   MOLECULAR ECOLOGY

Measures of linkage disequilibrium among neighbouring SNPs indicate asymmetries across the house mouse hybrid zone

(2011) LIUYANG WANG et al.   MOLECULAR ECOLOGY

Hybrid origin of Audubon’s warbler

(2011) ALAN BRELSFORD et al.   MOLECULAR ECOLOGY

Hybrid speciation in sparrows I: phenotypic intermediacy, genetic admixture and barriers to gene flow

(2011) JO S. HERMANSEN et al.   MOLECULAR ECOLOGY

Species tree inference in a recent radiation of orioles (Genus Icterus): Multiple markers and methods reveal cytonuclear discordance in the northern oriole group

(2011) Frode Jacobsen et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Unidirectional Hybridization and Introgression in an Avian Contact Zone: Evidence from Genetic Markers, Morphology, and Comparisons with Laboratory-Raised F1Hybrids

(2010) Paula M. den Hartog et al.   AUK

Prospects for the Use of Next-Generation Sequencing Methods in Ornithology

(2010) Heather Lerner et al.   AUK

Widespread hybridization between the Greater Spotted Eagle Aquila clanga and the Lesser Spotted Eagle Aquila pomarina (Aves: Accipitriformes) in Europe

(2010) ÜLO VÄLI et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Introgressive hybridization and the evolutionary history of the herring gull complex revealed by mitochondrial and nuclear DNA

(2010) Viviane Sternkopf et al.   BMC EVOLUTIONARY BIOLOGY

DNA barcoding of Scandinavian birds reveals divergent lineages in trans-Atlantic species

(2010) Arild Johnsen et al.   JOURNAL OF ORNITHOLOGY

Genetic introgression between an introduced babbler, the Chinese hwameiLeucodioptron c. canorum, and the endemic Taiwan hwameiL. taewanus: a multiple marker systems analysis

(2010) Shou-Hsien Li et al.   JOURNAL OF AVIAN BIOLOGY

Microsatellites and single nucleotide polymorphisms in avian hybrid identification: a comparative case study

(2010) Ülo Väli et al.   JOURNAL OF AVIAN BIOLOGY

Speciation genetics of biological invasions with hybridization

(2010) ROBB T. BRUMFIELD   MOLECULAR ECOLOGY

No evidence for Z-chromosome rearrangements between the pied flycatcher and the collared flycatcher as judged by gene-based comparative genetic maps

(2010) NICLAS BACKSTRÖM et al.   MOLECULAR ECOLOGY

Range expansion and hybridization in Round Island petrels (Pterodroma spp.): evidence from microsatellite genotypes

(2010) RUTH M. BROWN et al.   MOLECULAR ECOLOGY

Genetic analyses reveal hybridization but no hybrid swarm in one of the world’s rarest birds

(2010) TAMMY E. STEEVES et al.   MOLECULAR ECOLOGY

Diversification at high latitudes: speciation of buntings in the genusPlectrophenaxinferred from mitochondrial and nuclear markers

(2010) JAMES M. MALEY et al.   MOLECULAR ECOLOGY

Rejecting strictly allopatric speciation on a continental island: prolonged postdivergence gene flow between Taiwan (Leucodioptron taewanus, Passeriformes Timaliidae) and Chinese (L. canorum canorum) hwameis

(2010) JING-WEN LI et al.   MOLECULAR ECOLOGY

Congruence between nuclear and mitochondrial DNA: Combination of multiple nuclear introns resolves a well-supported phylogeny of New World orioles (Icterus)

(2010) Frode Jacobsen et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Toward a resolution of a taxonomic enigma: First genetic analyses of Paradoxornis webbianus and Paradoxornis alphonsianus (Aves: Paradoxornithidae) from China and Italy

(2010) Angelica Crottini et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Genetic history of an archaic hominin group from Denisova Cave in Siberia

(2010) David Reich et al.   NATURE

Conspecific versus heterospecific gene exchange between populations of Darwin's finches

(2010) P. R. Grant et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Divergence with gene flow as facilitated by ecological differences: within-island variation in Darwin's finches

(2010) L. F. de Leon et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Morphological and Genetic Patterns of Hybridization of Herring Gulls (Larus argentatus) and Glaucous Gulls (L. hyperboreus) in Iceland

(2009) Snæbjörn Pálsson et al.   AUK

Mitochondrial introgression and replacement between yellowhammers (Emberiza citrinella) and pine buntings (Emberiza leucocephalos) (Aves: Passeriformes)

(2009) DARREN E. IRWIN et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Phylogeography: its development and impact in Australo-Papuan ornithology with special reference to paraphyly in Australian birds

(2009) Leo Joseph et al.   EMU

Filling the gap - COI barcode resolution in eastern Palearctic birds

(2009) Kevin CR Kerr et al.   Frontiers in Zoology

A tangled tale of two teal: population history of the greyAnas gracilisand chestnut tealA. castaneaof Australia

(2009) Leo Joseph et al.   JOURNAL OF AVIAN BIOLOGY

Extensive hybridization in a contact zone between MacGillivray's warblersOporornistolmieiand mourning warblersO. philadelphiadetected using molecular and morphological analyses

(2009) Darren E. Irwin et al.   JOURNAL OF AVIAN BIOLOGY

Analysis of multilocus DNA reveals hybridization in a contact zone betweenEmpidonaxflycatchers

(2009) Andrew C. Rush et al.   JOURNAL OF AVIAN BIOLOGY

A hybrid zone revisited: molecular and morphological analysis of the maintenance, movement, and evolution of a Great Plains avian (Cardinalidae:Pheucticus) hybrid zone

(2009) R. D. METTLER et al.   MOLECULAR ECOLOGY

Speciation inPasserinabuntings: introgression patterns of sex-linked loci identify a candidate gene region for reproductive isolation

(2009) MATTHEW D. CARLING et al.   MOLECULAR ECOLOGY

The effect of marker choice on estimated levels of introgression across an avian (Pipridae:Manacus) hybrid zone

(2009) TAMAKI YURI et al.   MOLECULAR ECOLOGY

DNA barcodes provide new evidence of a recent radiation in the genusSporophila(Aves: Passeriformes)

(2009) LEONARDO CAMPAGNA et al.   Molecular Ecology Resources

The Lanius excubitor (Aves, Passeriformes) conundrum—Taxonomic dilemma when molecular and non-molecular data tell different stories

(2009) Urban Olsson et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Speciation and phylogeography of giant petrels Macronectes

(2009) N.M.S.M. Techow et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The causes of mitochondrial DNA gene tree paraphyly in birds

(2009) Bailey D. McKay et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Probing Evolutionary Patterns in Neotropical Birds through DNA Barcodes

(2009) Kevin C. R. Kerr et al.   PLoS One

The secondary contact phase of allopatric speciation in Darwin's finches

(2009) P. R. Grant et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Natural selection and phylogenetic analysis

(2009) S. V. Edwards   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gene flow and species delimitation

(2009) Rémy J. Petit et al.   TRENDS IN ECOLOGY & EVOLUTION

Genetic introgression, incomplete lineage sorting and faulty taxonomy create multiple cases of polyphyly in a montane clade of tyrant-flycatchers (Elaenia, Tyrannidae)

(2009) Frank E. Rheindt et al.   ZOOLOGICA SCRIPTA

The Genomics of Speciation in Drosophila: Diversity, Divergence, and Introgression Estimated Using Low-Coverage Genome Sequencing

(2009) Rob J. Kulathinal et al.   PLoS Genetics

Single mitochondrial gene barcodes reliably identify sister-species in diverse clades of birds

(2008) Erika S Tavares et al.   BMC EVOLUTIONARY BIOLOGY

The dynamic evolutionary history of the bananaquit (Coereba flaveola) in the Caribbean revealed by a multigene analysis

(2008) Eva Bellemain et al.   BMC EVOLUTIONARY BIOLOGY

Speciation with gene flow in the large white-headed gulls: does selection counterbalance introgression?

(2008) L Gay et al.   HEREDITY

Evidence from DNA nucleotide sequences and ISSR profiles indicates paraphyly in subspecies of the Southern Grey Shrike (Lanius meridionalis)

(2008) Javier Gonzalez et al.   JOURNAL OF ORNITHOLOGY

Calibrating the avian molecular clock

(2008) J. T. WEIR et al.   MOLECULAR ECOLOGY

Mitochondrial DNA points to Lanius meridionalis as a polyphyletic species

(2008) Tilman E. Klassert et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Low support for separate species within the redpoll complex (Carduelis flammea–hornemanni–cabaret) from analyses of mtDNA and microsatellite markers

(2008) Gunnhild Marthinsen et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Patchy distributions belie morphological and genetic homogeneity in rosy-finches

(2008) Sergei V. Drovetski et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Genomic evidence for a large-Z effect

(2008) H. Ellegren   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Comparison of Species Tree Methods for Reconstructing the Phylogeny of Bearded Manakins (Aves: Pipridae, Manacus) from Multilocus Sequence Data

(2008) Robb T. Brumfield et al.   SYSTEMATIC BIOLOGY

Phylogeny and classification of the Old World Emberizini (Aves, Passeriformes)

(2007) Per Alström et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Speciation, introgressive hybridization and nonlinear rate of molecular evolution in flycatchers

(2003) Glenn-Peter Saetre et al.   MOLECULAR ECOLOGY