An efficient and cost-effective approach for genic microsatellite marker-based large-scale trait association mapping: identification of candidate genes for seed weight in chickpea

Natural Variations and Genome-Wide Association Studies in Crop Plants

(2013) Xuehui Huang et al.   Annual Review of Plant Biology

Functionally Relevant Microsatellite Markers From Chickpea Transcription Factor Genes for Efficient Genotyping Applications and Trait Association Mapping

(2013) A. Kujur et al.   DNA RESEARCH

Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement

(2013) Rajeev K Varshney et al.   NATURE BIOTECHNOLOGY

A draft genome sequence of the pulse crop chickpea (Cicer arietinum L.)

(2013) Mukesh Jain et al.   PLANT JOURNAL

SSR markers linked to kernel weight and tiller number in sorghum identified by association mapping

(2012) Hari D. Upadhyaya et al.   EUPHYTICA

Associative transcriptomics of traits in the polyploid crop species Brassica napus

(2012) Andrea L Harper et al.   NATURE BIOTECHNOLOGY

Transcriptome sequencing of wild chickpea as a rich resource for marker development

(2012) Shalu Jhanwar et al.   PLANT BIOTECHNOLOGY JOURNAL

Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes

(2012) Pavana J. Hiremath et al.   PLANT BIOTECHNOLOGY JOURNAL

Allelic Analysis of Sheath Blight Resistance with Association Mapping in Rice

(2012) Limeng Jia et al.   PLoS One

Evolution and Association Analysis of Ghd7 in Rice

(2012) Li Lu et al.   PLoS One

Allelic Variations of a Light Harvesting Chlorophyll A/B-Binding Protein Gene (Lhcb1) Associated with Agronomic Traits in Barley

(2012) Yanshi Xia et al.   PLoS One

Genome-wide association mapping of leaf metabolic profiles for dissecting complex traits in maize

(2012) C. Riedelsheimer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

EST-derived genic molecular markers: development and utilization for generating an advanced transcript map of chickpea

(2012) Shalu Choudhary et al.   THEORETICAL AND APPLIED GENETICS

Patterns of linkage disequilibrium and association mapping in diploid alfalfa (M. sativa L.)

(2012) Muhammet Sakiroglu et al.   THEORETICAL AND APPLIED GENETICS

SNP in starch biosynthesis genes associated with nutritional and functional properties of rice

(2012) Ardashir Kharabian-Masouleh et al.   Scientific Reports

Transcription factors regulating the progression of monocot and dicot seed development

(2011) Pinky Agarwal et al.   BIOESSAYS

Advancing the STMS genomic resources for defining new locations on the intraspecific genetic linkage map of chickpea (Cicer arietinum L.)

(2011) Rashmi Gaur et al.   BMC GENOMICS

Estimates of array and pool-construction variance for planning efficient DNA-pooling genome wide association studies

(2011) Madalene A Earp et al.   BMC Medical Genomics

Genome wide association analyses for drought tolerance related traits in barley (Hordeum vulgare L.)

(2011) R.K. Varshney et al.   FIELD CROPS RESEARCH

Identification of SSR markers associated with saccharification yield using pool-based genome-wide association mapping in sorghum

(2011) Yi-Hong Wang et al.   GENOME

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Identification of SSR markers associated with height using pool-based genome-wide association mapping in sorghum

(2011) Yi-Hong Wang et al.   MOLECULAR BREEDING

Natural variation in GS5 plays an important role in regulating grain size and yield in rice

(2011) Yibo Li et al.   NATURE GENETICS

Large-scale transcriptome analysis in chickpea (Cicer arietinum L.), an orphan legume crop of the semi-arid tropics of Asia and Africa

(2011) Pavana J. Hiremath et al.   PLANT BIOTECHNOLOGY JOURNAL

Gene Discovery and Tissue-Specific Transcriptome Analysis in Chickpea with Massively Parallel Pyrosequencing and Web Resource Development

(2011) R. Garg et al.   PLANT PHYSIOLOGY

Development and use of genic molecular markers (GMMs) for construction of a transcript map of chickpea (Cicer arietinum L.)

(2011) Neha Gujaria et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

DNA polymorphisms and haplotype patterns of transcription factors involved in barley endosperm development are associated with key agronomic traits

(2010) Grit Haseneyer et al.   BMC PLANT BIOLOGY

Using association mapping to dissect the genetic basis of complex traits in plants

(2010) D. Hall et al.   Briefings in Functional Genomics

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

(2010) Susanna Atwell et al.   NATURE

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

Towards identifying genes underlying ecologically relevant traits in Arabidopsis thaliana

(2010) Joy Bergelson et al.   NATURE REVIEWS GENETICS

Pooling-Based Genome-Wide Association Study Implicates Gamma-Glutamyltransferase 1 (GGT1) Gene in Pancreatic Carcinogenesis

(2010) Brenda Diergaarde et al.   PANCREATOLOGY

Genome-wide association mapping to candidate polymorphism resolution in the unsequenced barley genome

(2010) J. Cockram et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Linking differential domain functions of the GS3 protein to natural variation of grain size in rice

(2010) H. Mao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Candidate genes versus genome-wide associations: which are better for detecting genetic susceptibility to infectious disease?

(2010) W. Amos et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establishment of new anchor points with Medicago truncatula genome

(2010) Spurthi N. Nayak et al.   THEORETICAL AND APPLIED GENETICS

Candidate Gene Association Mapping of Arabidopsis Flowering Time

(2009) I. M. Ehrenreich et al.   GENETICS

Association mapping of stigma and spikelet characteristics in rice (Oryza sativa L.)

(2009) Wen Gui Yan et al.   MOLECULAR BREEDING

A genome-wide association study for late-onset Alzheimer's disease using DNA pooling

(2008) Richard Abraham et al.   BMC Medical Genomics

Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.)

(2008) Hari D Upadhyaya et al.   BMC PLANT BIOLOGY

A note on the evolution of kabuli chickpeas as shown by induced mutations in Cicer reticulatum Ladizinsky

(2008) Cengiz Toker   GENETIC RESOURCES AND CROP EVOLUTION

Optimal DNA Pooling-Based Two-Stage Designs in Case-Control Association Studies

(2008) Yihong Zhao et al.   HUMAN HEREDITY

A genome-wide association study in 574 schizophrenia trios using DNA pooling

(2008) G Kirov et al.   MOLECULAR PSYCHIATRY

Development of chickpea EST-SSR markers and analysis of allelic variation across related species

(2008) Shalu Choudhary et al.   THEORETICAL AND APPLIED GENETICS

Status and Prospects of Association Mapping in Plants

(2008) Chengsong Zhu et al.   Plant Genome