Lineage-Specific Transcriptional Profiles of Symbiodinium spp. Unaltered by Heat Stress in a Coral Host

Integrating microRNA and mRNA expression profiling in Symbiodinium microadriaticum, a dinoflagellate symbiont of reef-building corals

(2013) Sebastian Baumgarten et al.   BMC GENOMICS

Genomic basis for coral resilience to climate change

(2013) Daniel J. Barshis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Protein evolution in two co-occurring types of Symbiodinium: an exploration into the genetic basis of thermal tolerance in Symbiodinium clade D

(2012) Jason T Ladner et al.   BMC EVOLUTIONARY BIOLOGY

Differential transcription of heat shock protein 90 (HSP90) in the dinoflagellate Prorocentrum minimum by copper and endocrine-disrupting chemicals

(2012) Ruoyu Guo et al.   ECOTOXICOLOGY

The physiological and molecular responses of larvae from the reef-building coral Pocillopora damicornis exposed to near-future increases in temperature and pCO2

(2012) H. M. Putnam et al.   MARINE BIOLOGY

Extensive sympatry, cryptic diversity and introgression throughout the geographic distribution of two coral species complexes

(2012) JASON T. LADNER et al.   MOLECULAR ECOLOGY

The simple fool's guide to population genomics via RNA-Seq: an introduction to high-throughput sequencing data analysis

(2012) Pierre De Wit et al.   Molecular Ecology Resources

Symbiodinium Transcriptomes: Genome Insights into the Dinoflagellate Symbionts of Reef-Building Corals

(2012) Till Bayer et al.   PLoS One

Coral Thermal Tolerance: Tuning Gene Expression to Resist Thermal Stress

(2012) Anthony J. Bellantuono et al.   PLoS One

Gene expression changes governing extreme dehydration tolerance in an Antarctic insect

(2012) N. M. Teets et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Recent progress in Symbiodinium transcriptomics

(2011) William Leggat et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Differential Responses of the Coral Host and Their Algal Symbiont to Thermal Stress

(2011) William Leggat et al.   PLoS One

Resistance to thermal stress in corals without changes in symbiont composition

(2011) A. J. Bellantuono et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Projecting Coral Reef Futures Under Global Warming and Ocean Acidification

(2011) J. M. Pandolfi et al.   SCIENCE

Coral thermal tolerance shaped by local adaptation of photosymbionts

(2011) E. J. Howells et al.   Nature Climate Change

Differential Regulation by Heat Stress of Novel Cytochrome P450 Genes from the Dinoflagellate Symbionts of Reef-Building Corals

(2010) N. N. Rosic et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Gene expression profiles of cytosolic heat shock proteins Hsp70 and Hsp90 from symbiotic dinoflagellates in response to thermal stress: possible implications for coral bleaching

(2010) Nedeljka N. Rosic et al.   CELL STRESS & CHAPERONES

Many corals host thermally resistant symbionts in high-temperature habitat

(2010) T. A. Oliver et al.   CORAL REEFS

Transcriptomic responses to heat stress in invasive and native blue mussels (genus Mytilus): molecular correlates of invasive success

(2010) B. L. Lockwood et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Protein expression and genetic structure of the coralPorites lobatain an environmentally extreme Samoan back reef: does host genotype limit phenotypic plasticity?

(2010) D. J. BARSHIS et al.   MOLECULAR ECOLOGY

A new Symbiodinium clade (Dinophyceae) from soritid foraminifera in Hawai’i

(2010) Xavier Pochon et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Cross-Kingdom Comparison of Transcriptomic Adjustments to Low-Oxygen Stress Highlights Conserved and Plant-Specific Responses

(2010) A. Mustroph et al.   PLANT PHYSIOLOGY

3′-End Sequencing for Expression Quantification (3SEQ) from Archival Tumor Samples

(2010) Andrew H. Beck et al.   PLoS One

Location-Specific Responses to Thermal Stress in Larvae of the Reef-Building Coral Montastraea faveolata

(2010) Nicholas R. Polato et al.   PLoS One

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Juvenile corals can acquire more carbon from high-performance algal symbionts

(2009) N. E. Cantin et al.   CORAL REEFS

Symbiont diversity may help coral reefs survive moderate climate change

(2009) Marissa L. Baskett et al.   ECOLOGICAL APPLICATIONS

Genetic variation in responses to a settlement cue and elevated temperature in the reef-building coral Acropora millepora

(2009) E Meyer et al.   MARINE ECOLOGY PROGRESS SERIES

Distributions of stress-resistant coral symbionts match environmental patterns at local but not regional scales

(2009) TA Oliver et al.   MARINE ECOLOGY PROGRESS SERIES

The effect of thermal history on the susceptibility of reef-building corals to thermal stress

(2008) R. Middlebrook et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

A transcriptomic analysis of the stress induced by capture-release health assessment studies in wild dolphins (Tursiops truncatus)

(2008) A. MANCIA et al.   MOLECULAR ECOLOGY

Transcriptomic variation and plasticity in rufous-collared sparrows (Zonotrichia capensis) along an altitudinal gradient

(2008) ZACHARY A. CHEVIRON et al.   MOLECULAR ECOLOGY

Differential gene expression during thermal stress and bleaching in the Caribbean coralMontastraea faveolata

(2008) M. K. DESALVO et al.   MOLECULAR ECOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

GOEAST: a web-based software toolkit for Gene Ontology enrichment analysis

(2008) Qi Zheng et al.   NUCLEIC ACIDS RESEARCH

Functional diversity in coral-dinoflagellate symbiosis

(2008) M. Stat et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Species-specific interactions between algal endosymbionts and coral hosts define their bleaching response to heat and light stress

(2008) D. Abrego et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A community change in the algal endosymbionts of a scleractinian coral following a natural bleaching event: field evidence of acclimatization

(2008) A.M Jones et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

One-Third of Reef-Building Corals Face Elevated Extinction Risk from Climate Change and Local Impacts

(2008) K. E. Carpenter et al.   SCIENCE

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

(2008) U. Nagalakshmi et al.   SCIENCE