Joining Forces: Integrating Proteomics and Cross-linking with the Mass Spectrometry of Intact Complexes
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Title
Joining Forces: Integrating Proteomics and Cross-linking with the Mass Spectrometry of Intact Complexes
Authors
Keywords
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Journal
MOLECULAR & CELLULAR PROTEOMICS
Volume 11, Issue 3, Pages R111.014027
Publisher
American Society for Biochemistry & Molecular Biology (ASBMB)
Online
2011-12-17
DOI
10.1074/mcp.r111.014027
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- (2011) Jan Seebacher et al. CELL
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- (2011) Anna Malovannaya et al. CELL
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- (2011) Ah Young Park et al. CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY
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- (2011) Eri Sakata et al. MOLECULAR CELL
- Structural basis for the subunit assembly of the anaphase-promoting complex
- (2011) Anne Schreiber et al. NATURE
- Architecture and dynamics of an A-kinase anchoring protein 79 (AKAP79) signaling complex
- (2011) M. G. Gold et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mass Spectrometry Reveals Stable Modules in holo and apo RNA Polymerases I and III
- (2011) Laura A. Lane et al. STRUCTURE
- Chemical Cross-Linking and Mass Spectrometry As a Low-Resolution Protein Structure Determination Technique
- (2010) Pragya Singh et al. ANALYTICAL CHEMISTRY
- Alternate Dissociation Pathways Identified in Charge-Reduced Protein Complex Ions
- (2010) Kevin Pagel et al. ANALYTICAL CHEMISTRY
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- ICC-CLASS: isotopically-coded cleavable crosslinking analysis software suite
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- (2010) Hua Xu et al. JOURNAL OF PROTEOME RESEARCH
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- Structures of APC/CCdh1 with substrates identify Cdh1 and Apc10 as the D-box co-receptor
- (2010) Paula C. A. da Fonseca et al. NATURE
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- (2010) Inés G Muñoz et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
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- Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3
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- High-resolution mass spectrometry of viral assemblies: Molecular composition and stability of dimorphic hepatitis B virus capsids
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