Taxonomic Profiling and Metagenome Analysis of a Microbial Community from a Habitat Contaminated with Industrial Discharges

A polyphasic approach for assessing the suitability of bioremediation for the treatment of hydrocarbon-impacted soil

(2013) Eric M. Adetutu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Bacterial Metabolism of Polychlorinated Biphenyls

(2012) Dietmar H. Pieper et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

Exposure of Soil Microbial Communities to Chromium and Arsenic Alters Their Diversity and Structure

(2012) Cody S. Sheik et al.   PLoS One

Identification of Bacteria Utilizing Biphenyl, Benzoate, and Naphthalene in Long-Term Contaminated Soil

(2012) Ondrej Uhlik et al.   PLoS One

Pyrosequencing Investigation into the Bacterial Community in Permafrost Soils along the China-Russia Crude Oil Pipeline (CRCOP)

(2012) Sizhong Yang et al.   PLoS One

Identification of Nitrogen-Incorporating Bacteria in Petroleum-Contaminated Arctic Soils by Using [15N]DNA-Based Stable Isotope Probing and Pyrosequencing

(2011) Terrence H. Bell et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metabolic networks, microbial ecology and ‘omics’ technologies: towards understanding in situ biodegradation processes

(2010) Ramiro Vilchez-Vargas et al.   ENVIRONMENTAL MICROBIOLOGY

Hyperthermophilic phosphotriesterases/lactonases for the environment and human health

(2010) Luigi Mandrich et al.   ENVIRONMENTAL TECHNOLOGY

Diversity, Abundance, and Consistency of Microbial Oxygenase Expression and Biodegradation in a Shallow Contaminated Aquifer

(2009) J. M. Yagi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Advances in molecular and “-omics” technologies to gauge microbial communities and bioremediation at xenobiotic/anthropogen contaminated sites

(2009) Chirayu Desai et al.   BIORESOURCE TECHNOLOGY

Metagenomics reveals diversity and abundance ofmeta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation

(2009) Maria V. Brennerova et al.   ENVIRONMENTAL MICROBIOLOGY

The molecular basis for adaptive evolution in novel extradiol dioxygenases retrieved from the metagenome

(2009) Hikaru Suenaga et al.   FEMS MICROBIOLOGY ECOLOGY

Novel organization of aromatic degradation pathway genes in a microbial community as revealed by metagenomic analysis

(2009) Hikaru Suenaga et al.   ISME Journal

The University of Minnesota Biocatalysis/Biodegradation Database: improving public access

(2009) Junfeng Gao et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Genomic analysis of polycyclic aromatic hydrocarbon degradation in Mycobacterium vanbaalenii PYR-1

(2008) Seong-Jae Kim et al.   BIODEGRADATION

Development of an oligonucleotide microarray to detect di- and monooxygenase genes for benzene degradation in soil

(2008) Shoko Iwai et al.   FEMS MICROBIOLOGY LETTERS

High aromatic ring-cleavage diversity in birch rhizosphere: PAH treatment-specific changes of I.E.3 group extradiol dioxygenases and 16S rRNA bacterial communities in soil

(2008) Timo P Sipilä et al.   ISME Journal

Phylogenetic classification of short environmental DNA fragments

(2008) Lutz Krause et al.   NUCLEIC ACIDS RESEARCH

Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers

(2008) Z. Liu et al.   NUCLEIC ACIDS RESEARCH

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

Tracking the influence of long-term chromium pollution on soil bacterial community structures by comparative analyses of 16S rRNA gene phylotypes

(2008) Chirayu Desai et al.   RESEARCH IN MICROBIOLOGY