Mass spectrometry based environmental metabolomics: a primer and review
Published 2012 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Mass spectrometry based environmental metabolomics: a primer and review
Authors
Keywords
Stress, Mechanism, Metabolic fingerprinting, Orbitrap, FT-ICR, LC–MS/MS
Journal
Metabolomics
Volume 9, Issue S1, Pages 144-158
Publisher
Springer Nature
Online
2012-03-08
DOI
10.1007/s11306-012-0412-x
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Characterization of Isotopic Abundance Measurements in High Resolution FT-ICR and Orbitrap Mass Spectra for Improved Confidence of Metabolite Identification
- (2011) Ralf J. M. Weber et al. ANALYTICAL CHEMISTRY
- Exploring Matrix Effects and Quantification Performance in Metabolomics Experiments Using Artificial Biological Gradients
- (2011) Henning Redestig et al. ANALYTICAL CHEMISTRY
- Exceptional Production of both Prodigiosin and Cycloprodigiosin as Major Metabolic Constituents by a Novel Marine Bacterium, Zooshikella rubidus S1-1
- (2011) Jong Suk Lee et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Metabolomics Reveals Target and Off-Target Toxicities of a Model Organophosphate Pesticide to Roach (Rutilus rutilus): Implications for Biomonitoring
- (2011) Andrew D. Southam et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Metabolomics of Microliter Hemolymph Samples Enables an Improved Understanding of the Combined Metabolic and Transcriptional Responses ofDaphnia magnato Cadmium
- (2011) Helen C. Poynton et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Response to adverse conditions in two strains of the extremely halophilic species Salinibacter ruber
- (2011) Jocelyn Brito-Echeverría et al. EXTREMOPHILES
- New Applications of Mass Spectrometry in Lipid Analysis
- (2011) Robert C. Murphy et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Ecosystem, Location, and Climate Effects on Foliar Secondary Metabolites of Lodgepole Pine Populations from Central British Columbia
- (2011) Christopher M. Wallis et al. JOURNAL OF CHEMICAL ECOLOGY
- Differences in Metabolism between the Biofilm and Planktonic Response to Metal Stress
- (2011) Sean C. Booth et al. JOURNAL OF PROTEOME RESEARCH
- Metabolic profiling reveals growth stage variability in diatom exudates
- (2011) Alexandra Barofsky et al. LIMNOLOGY AND OCEANOGRAPHY-METHODS
- Evolution and metabolic significance of the urea cycle in photosynthetic diatoms
- (2011) Andrew E. Allen et al. NATURE
- Metabolic cycles in a circannual hibernator
- (2011) L. Elaine Epperson et al. PHYSIOLOGICAL GENOMICS
- Multi-Segment Direct Inject nano-ESI-LTQ-FT-ICR-MS/MS For Protein Identification
- (2011) Jing Chen et al. Proteome Science
- The Ecoresponsive Genome of Daphnia pulex
- (2011) J. K. Colbourne et al. SCIENCE
- Fourier transform mass spectrometry for metabolome analysis
- (2010) C. Junot et al. ANALYST
- Global characterization of the photosynthetic glycerolipids from a marine diatom Stephanodiscus sp. by ultra performance liquid chromatography coupled with electrospray ionization-quadrupole-time of flight mass spectrometry
- (2010) Jilin Xu et al. ANALYTICA CHIMICA ACTA
- High-Throughput and Multiplexed LC/MS/MRM Method for Targeted Metabolomics
- (2010) Ru Wei et al. ANALYTICAL CHEMISTRY
- Genomics in the ecological arena
- (2010) L. Orsini et al. Biology Letters
- Pathway analysis of the transcriptome and metabolome of salt sensitive and tolerant poplar species reveals evolutionary adaption of stress tolerance mechanisms
- (2010) Dennis Janz et al. BMC PLANT BIOLOGY
- Terpenoid metabolite profiling in Sitka spruce identifies association of dehydroabietic acid, (+)-3-carene, and terpinolene with resistance against white pine weevil
- (2010) Jeanne A. Robert et al. Botany
- Systems level studies of mammalian metabolomes: the roles of mass spectrometry and nuclear magnetic resonance spectroscopy
- (2010) Warwick B. Dunn et al. CHEMICAL SOCIETY REVIEWS
- MI-Pack: Increased confidence of metabolite identification in mass spectra by integrating accurate masses and metabolic pathways
- (2010) Ralf J.M. Weber et al. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS
- Abundant betaines in reef-building corals and ecological indicators of a photoprotective role
- (2010) R. W. Hill et al. CORAL REEFS
- Mixtures of similarly acting compounds in Daphnia magna: From gene to metabolite and beyond
- (2010) Tine Vandenbrouck et al. ENVIRONMENT INTERNATIONAL
- Disruption of the Steroid Metabolome in Fish Caused by Exposure to the Environmental Estrogen 17α-Ethinylestradiol
- (2010) Anel M. Flores-Valverde et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Systems biology: Leading the revolution in ecotoxicology
- (2010) Natàlia Garcia-Reyero et al. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY
- Determination of betaine metabolites and dimethylsulfoniopropionate in coral tissues using liquid chromatography–time-of-flight mass spectrometry and stable isotope-labeled internal standards
- (2010) Chao Li et al. JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES
- Lipidomics era: Accomplishments and challenges
- (2010) Maroun Bou Khalil et al. MASS SPECTROMETRY REVIEWS
- Semi-automated non-target processing in GC × GC–MS metabolomics analysis: applicability for biomedical studies
- (2010) Maud M. Koek et al. Metabolomics
- Metabolic fingerprinting as an indicator of biodiversity: towards understanding inter-specific relationships among Homoscleromorpha sponges
- (2010) Julijana Ivanišević et al. Metabolomics
- Quantitative metabolomics based on gas chromatography mass spectrometry: status and perspectives
- (2010) Maud M. Koek et al. Metabolomics
- Metabolomics in pesticide research and development: review and future perspectives
- (2010) Konstantinos A. Aliferis et al. Metabolomics
- Metabolomics: the chemistry between ecology and genetics
- (2010) MIRKA MACEL et al. Molecular Ecology Resources
- Fatty acid profiles as a potential lipidomic biomarker of exposure to brevetoxin for endangered Florida manatees (Trichechus manatus latirostris)
- (2010) Dana L. Wetzel et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Discriminating between Different Acute Chemical Toxicities via Changes in the Daphnid Metabolome
- (2010) Nadine S. Taylor et al. TOXICOLOGICAL SCIENCES
- Searching for signals in the noise: metabolomics in chemical ecology
- (2009) Emily K. Prince et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- Development of a Robust and Repeatable UPLC−MS Method for the Long-Term Metabolomic Study of Human Serum
- (2009) Eva Zelena et al. ANALYTICAL CHEMISTRY
- Metabolomic Profiling of Anionic Metabolites by Capillary Electrophoresis Mass Spectrometry
- (2009) Tomoyoshi Soga et al. ANALYTICAL CHEMISTRY
- FiehnLib: Mass Spectral and Retention Index Libraries for Metabolomics Based on Quadrupole and Time-of-Flight Gas Chromatography/Mass Spectrometry
- (2009) Tobias Kind et al. ANALYTICAL CHEMISTRY
- Mass spectrometry: from proteomics to metabolomics and lipidomics
- (2009) William J. Griffiths et al. CHEMICAL SOCIETY REVIEWS
- The European Union’s REACH regulation: a review of its history and requirements
- (2009) E. Spencer Williams et al. CRITICAL REVIEWS IN TOXICOLOGY
- Green Chemistry: Wilson and Schwarzman Respond
- (2009) Michael P. Wilson et al. ENVIRONMENTAL HEALTH PERSPECTIVES
- UPLC-MS-Based Analysis of Human Plasma for Metabonomics Using Solvent Precipitation or Solid Phase Extraction
- (2009) Filippos Michopoulos et al. JOURNAL OF PROTEOME RESEARCH
- Metabolomic applications of HILIC-LC-MS
- (2009) Simon Cubbon et al. MASS SPECTROMETRY REVIEWS
- Environmental metabolomics: a critical review and future perspectives
- (2009) Jacob G. Bundy et al. Metabolomics
- Inter-laboratory reproducibility of fast gas chromatography–electron impact–time of flight mass spectrometry (GC–EI–TOF/MS) based plant metabolomics
- (2009) J. William Allwood et al. Metabolomics
- Methodological considerations in the development of HPLC-MS methods for the analysis of rodent plasma for metabonomic studies
- (2009) Lindsay Lai et al. Molecular BioSystems
- Semi-quantitative and structural metabolic phenotyping by direct infusion ion trap mass spectrometry and its application in genetical metabolomics
- (2009) Albert Koulman et al. RAPID COMMUNICATIONS IN MASS SPECTROMETRY
- Mass spectrometry-based technologies for high-throughput metabolomics
- (2009) Jun Han et al. Bioanalysis
- Methodology for Profiling the Steroid Metabolome in Animal Tissues Using Ultraperformance Liquid Chromatography−Electrospray-Time-of-Flight Mass Spectrometry
- (2008) Anel M. Flores-Valverde et al. ANALYTICAL CHEMISTRY
- Development of GCxGC/TOF-MS metabolomics for use in ecotoxicological studies with invertebrates
- (2008) Kimberly Ralston-Hooper et al. AQUATIC TOXICOLOGY
- Improvement of sample throughput using fast gas chromatography mass-spectrometry for biochemical diagnosis of organic acid disorders
- (2008) Shuichi Kawana et al. CLINICA CHIMICA ACTA
- International NMR-Based Environmental Metabolomics Intercomparison Exercise
- (2008) Mark R. Viant et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Metabolite profiling of the benthic diatom Cocconeis scutellum by GC-MS
- (2008) Michela Nappo et al. JOURNAL OF APPLIED PHYCOLOGY
- A matter of fat: An introduction to lipidomic profiling methods
- (2008) Lee D. Roberts et al. JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES
- Metabolomics reveals unique and shared metabolic changes in response to heat shock, freezing and desiccation in the Antarctic midge, Belgica antarctica
- (2008) M. Robert Michaud et al. JOURNAL OF INSECT PHYSIOLOGY
- Correlating the Transcriptome, Proteome, and Metabolome in the Environmental Adaptation of a Hyperthermophile
- (2008) Sunia A. Trauger et al. JOURNAL OF PROTEOME RESEARCH
- Hydrophilic interaction and reversed-phase ultra-performance liquid chromatography TOF-MS for metabonomic analysis of Zucker rat urine
- (2008) Helen G. Gika et al. JOURNAL OF SEPARATION SCIENCE
- 1H NMR and GC/MS metabolomics of earthworm responses to sub-lethal DDT and endosulfan exposure
- (2008) Jennifer R. McKelvie et al. Metabolomics
- A metabolomics approach to assessing phytotoxic effects on the green alga Scenedesmus vacuolatus
- (2008) Christina Kluender et al. Metabolomics
- Intraspecfic variation in cold-temperature metabolic phenotypes of Arabidopsis lyrata ssp. petraea
- (2008) Matthew P. Davey et al. Metabolomics
- A new approach to toxicity testing in Daphnia magna: application of high throughput FT-ICR mass spectrometry metabolomics
- (2008) Nadine S. Taylor et al. Metabolomics
- Towards high-throughput metabolomics using ultrahigh-field Fourier transform ion cyclotron resonance mass spectrometry
- (2008) Jun Han et al. Metabolomics
- Metabolomic analysis of the interaction between plants and herbivores
- (2008) Jeroen J. Jansen et al. Metabolomics
- Contributions from metabolomics to fish research
- (2008) Linda M. Samuelsson et al. Molecular BioSystems
- Recent developments in environmental metabolomics
- (2008) Mark R. Viant Molecular BioSystems
- Human metabolic phenotype diversity and its association with diet and blood pressure
- (2008) Elaine Holmes et al. NATURE
- Analysis of the hibernation cycle using LC-MS-based metabolomics in ground squirrel liver
- (2008) Clark J. Nelson et al. PHYSIOLOGICAL GENOMICS
- Development and validation of a gas chromatography/mass spectrometry metabonomic platform for the global profiling of urinary metabolites
- (2008) Kishore K. Pasikanti et al. RAPID COMMUNICATIONS IN MASS SPECTROMETRY
- Extending the breadth of metabolite profiling by gas chromatography coupled to mass spectrometry
- (2008) Oliver Fiehn TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- High-throughput tissue extraction protocol for NMR- and MS-based metabolomics
- (2007) Huifeng Wu et al. ANALYTICAL BIOCHEMISTRY
- A metabolomics based approach to assessing the toxicity of the polyaromatic hydrocarbon pyrene to the earthworm Lumbricus rubellus
- (2007) Oliver A.H. Jones et al. CHEMOSPHERE
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started