Implications of aromatic-aromatic interactions: From protein structures to peptide models

Spontaneous Structural Transition in Phospholipid-Inspired Aromatic Phosphopeptide Nanostructures

(2015) Michal Pellach et al.   ACS Nano

Mutational Analysis of the Ability of Resveratrol To Inhibit Amyloid Formation by Islet Amyloid Polypeptide: Critical Evaluation of the Importance of Aromatic–Inhibitor and Histidine–Inhibitor Interactions

(2015) Ling-Hsien Tu et al.   BIOCHEMISTRY

Mechanisms of Integral Membrane Protein Insertion and Folding

(2015) Florian Cymer et al.   JOURNAL OF MOLECULAR BIOLOGY

NMR Analysis of Tuning Cross-Strand Phe/Tyr/Trp–Trp Interactions in Designed β-Hairpin Peptides: Terminal Switch from l to d Amino Acid as a Strategy for β-Hairpin Capping

(2015) Kamlesh M. Makwana et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Nature of aryl–tyrosine interactions contribute to β-hairpin scaffold stability: NMR evidence for alternate ring geometry

(2015) Kamlesh Madhusudan Makwana et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Hole hopping through tyrosine/tryptophan chains protects proteins from oxidative damage

(2015) Harry B. Gray et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Monitoring and Targeting the Initial Dimerization Stage of Amyloid Self-Assembly

(2014) Yaron Bram et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Energetics of Membrane Protein Folding

(2014) Karen G. Fleming   Annual Review of Biophysics

Toward understanding driving forces in membrane protein folding

(2014) Heedeok Hong   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Membrane protein folding and stability

(2014) Daniel Otzen   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Asymmetric Contribution of Aromatic Interactions Stems from Spatial Positioning of the Interacting Aryl Pairs in β-Hairpins

(2014) Kamlesh Madhusudan Makwana et al.   CHEMBIOCHEM

Designed Di-Heme Binding Helical Transmembrane Protein

(2014) Mukesh Mahajan et al.   CHEMBIOCHEM

Design of nanostructures based on aromatic peptide amphiphiles

(2014) Scott Fleming et al.   CHEMICAL SOCIETY REVIEWS

Juxtamembrane tryptophans have distinct roles in defining the OmpX barrel-micelle boundary and facilitating protein-micelle association

(2014) Deepti Chaturvedi et al.   FEBS LETTERS

Effect of Hydrophobic Interactions on the Folding Mechanism of β-Hairpins

(2014) Alexander Popp et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Exploring the sequence space for (tri-)peptide self-assembly to design and discover new hydrogels

(2014) Pim W. J. M. Frederix et al.   Nature Chemistry

Cross-strand histidine–aromatic interactions enhance acyl-transfer rates in beta-hairpin peptide catalysts

(2014) M. Matsumoto et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

The safety dance: biophysics of membrane protein folding and misfolding in a cellular context

(2014) Jonathan P. Schlebach et al.   QUARTERLY REVIEWS OF BIOPHYSICS

Differential Contribution of Tryptophans to the Folding and Stability of the Attachment Invasion Locus Transmembrane β-Barrel from Yersinia pestis

(2014) Ankit Gupta et al.   Scientific Reports

β-Hairpin Peptides: Heme Binding, Catalysis, and Structure in Detergent Micelles

(2013) Mukesh Mahajan et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

A Designed Three-Stranded β-Sheet in an α/β Hybrid Peptide

(2013) Rajesh Sonti et al.   CHEMISTRY-A EUROPEAN JOURNAL

The Role of Aromatic–Aromatic Interactions in Strand–Strand Stabilization of β-Sheets

(2013) Ivan L. Budyak et al.   JOURNAL OF MOLECULAR BIOLOGY

Comparative analysis of cross strand aromatic–Phe interactions in designed peptide β-hairpins

(2013) Kamlesh Madhusudan Makwana et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

Stabilizing effect of electrostatic vs. aromatic interactions in diproline nucleated peptide β-hairpins

(2013) Kamlesh Madhusudan Makwana et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

On the Importance and Origin of Aromatic Interactions in Chemistry and Biodisciplines

(2012) Kevin E. Riley et al.   ACCOUNTS OF CHEMICAL RESEARCH

Exploring and Exploiting Polar−π Interactions with Fluorinated Aromatic Amino Acids

(2012) Christopher J. Pace et al.   ACCOUNTS OF CHEMICAL RESEARCH

Carbohydrate–Aromatic Interactions

(2012) Juan Luis Asensio et al.   ACCOUNTS OF CHEMICAL RESEARCH

Aromatic–Proline Interactions: Electronically Tunable CH/π Interactions

(2012) Neal J. Zondlo   ACCOUNTS OF CHEMICAL RESEARCH

The Cation−π Interaction

(2012) Dennis A. Dougherty   ACCOUNTS OF CHEMICAL RESEARCH

Role of Aromatic Interactions in Amyloid Formation by Islet Amyloid Polypeptide

(2012) Ling-Hsien Tu et al.   BIOCHEMISTRY

Experimental Evaluation of CH-π Interactions in a Protein Core

(2012) Christopher J. Pace et al.   CHEMISTRY-A EUROPEAN JOURNAL

The Methionine-aromatic Motif Plays a Unique Role in Stabilizing Protein Structure

(2012) Christopher C. Valley et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Direct Evidence for CH···π Interaction Mediated Stabilization of Pro-cisPro Bond in Peptides with Pro-Pro-Aromatic motifs

(2012) Himal K. Ganguly et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Structural differences between thermophilic and mesophilic membrane proteins

(2012) Alejandro D. Meruelo et al.   PROTEIN SCIENCE

Stepwise Adaptations to Low Temperature as Revealed by Multiple Mutants of Psychrophilic α-Amylase from Antarctic Bacterium

(2011) Alexandre Cipolla et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Aromatic–Aromatic Interactions in Proteins: Beyond the Dimer

(2011) Esteban Lanzarotti et al.   Journal of Chemical Information and Modeling

Structure-based design of non-natural amino-acid inhibitors of amyloid fibril formation

(2011) Stuart A. Sievers et al.   NATURE

Geometry and Efficacy of Cross-Strand Trp/Trp, Trp/Tyr, and Tyr/Tyr Aromatic Interaction in a β-Hairpin Peptide

(2010) Ling Wu et al.   BIOCHEMISTRY

Tryptophan residues: Scarce in proteins but strong stabilizers of β-hairpin peptides

(2010) Clara M. Santiveri et al.   BIOPOLYMERS

Protein folding in membranes

(2010) Sebastian Fiedler et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Direct detection of CH/π interactions in proteins

(2010) Michael J. Plevin et al.   Nature Chemistry

Discrimination of thermophilic and mesophilic proteins

(2010) Todd J Taylor et al.   BMC STRUCTURAL BIOLOGY

Relationship between Hydrophobic Interactions and Secondary Structure Stability for Trpzip β-Hairpin Peptides†

(2009) Takahiro Takekiyo et al.   BIOCHEMISTRY

Role of Tryptophan−Tryptophan Interactions in Trpzip β-Hairpin Formation, Structure, and Stability

(2009) Ling Wu et al.   BIOCHEMISTRY

Disulfide Bonds versus Trp⋅⋅⋅Trp Pairs in Irregular β-Hairpins: NMR Structure of Vammin Loop 3-Derived Peptides as a Case Study

(2009) Yasmina Mirassou et al.   CHEMBIOCHEM

Contributions of all 20 amino acids at site 96 to the stability and structure of T4 lysozyme

(2009) Blaine H. M. Mooers et al.   PROTEIN SCIENCE

Very short peptides with stable folds: Building on the interrelationship of Trp/Trp, Trp/cation, and Trp/backbone-amide interaction geometries

(2008) Lisa Eidenschink et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Anion-π interactions

(2007) Brandi L. Schottel et al.   CHEMICAL SOCIETY REVIEWS

Context-Dependence of the Contribution of Disulfide Bonds to β-Hairpin Stability

(2007) Clara M. Santiveri et al.   CHEMISTRY-A EUROPEAN JOURNAL

The role of aromatic residues in the hydrophobic core of the villin headpiece subdomain

(2002) Benjamin S. Frank et al.   PROTEIN SCIENCE