Metatranscriptome analyses indicate resource partitioning between diatoms in the field
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Metatranscriptome analyses indicate resource partitioning between diatoms in the field
Authors
Keywords
-
Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 112, Issue 17, Pages E2182-E2190
Publisher
Proceedings of the National Academy of Sciences
Online
2015-04-14
DOI
10.1073/pnas.1421993112
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
- Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities
- (2014) Chris L Dupont et al. ISME Journal
- Many ways to stay in the game: individual variability maintains high biodiversity in planktonic microorganisms
- (2014) S. Menden-Deuer et al. Journal of the Royal Society Interface
- The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing
- (2014) Patrick J. Keeling et al. PLOS BIOLOGY
- De novo assembly of Aureococcus anophagefferens transcriptomes reveals diverse responses to the low nutrient and low light conditions present during blooms
- (2014) Kyle R. Frischkorn et al. Frontiers in Microbiology
- EGN: a wizard for construction of gene and genome similarity networks
- (2013) Sébastien Halary et al. BMC EVOLUTIONARY BIOLOGY
- Experimental evidence that evolutionarily diverse assemblages result in higher productivity
- (2013) M. W. Cadotte PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Whole transcriptome analysis of the silicon response of the diatom Thalassiosira pseudonana
- (2012) Roshan Shrestha et al. BMC GENOMICS
- Expression patterns reveal niche diversification in a marine microbial assemblage
- (2012) Scott M Gifford et al. ISME Journal
- Drivers of protistan grazing pressure: seasonal signals of plankton community composition and environmental conditions
- (2012) C Lawerence et al. MARINE ECOLOGY PROGRESS SERIES
- Biodiversity loss and its impact on humanity
- (2012) Bradley J. Cardinale et al. NATURE
- A travel guide to Cytoscape plugins
- (2012) Rintaro Saito et al. NATURE METHODS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics
- (2012) M. Lohse et al. NUCLEIC ACIDS RESEARCH
- The Transcriptome and Proteome of the Diatom Thalassiosira pseudonana Reveal a Diverse Phosphorus Stress Response
- (2012) Sonya T. Dyhrman et al. PLoS One
- Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability
- (2012) A. Marchetti et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Influence of cobalamin scarcity on diatom molecular physiology and identification of a cobalamin acquisition protein
- (2012) E. M. Bertrand et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Identifying reference genes with stable expression from high throughput sequence data
- (2012) Harriet Alexander et al. Frontiers in Microbiology
- Bacterial community transcription patterns during a marine phytoplankton bloom
- (2011) Johanna M. Rinta-Kanto et al. ENVIRONMENTAL MICROBIOLOGY
- Metatranscriptomic analysis of autonomously collected and preserved marine bacterioplankton
- (2011) Elizabeth A Ottesen et al. ISME Journal
- The relative importance of species diversity and functional group diversity on carbon uptake in phytoplankton communities
- (2011) Stephan Behl et al. LIMNOLOGY AND OCEANOGRAPHY
- Proteome Changes Driven by Phosphorus Deficiency and Recovery in the Brown Tide-Forming Alga Aureococcus anophagefferens
- (2011) Louie L. Wurch et al. PLoS One
- Cryptic planktonic diatom challenges phytoplankton ecologists
- (2011) T. J. Smayda PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Fast and accurate long-read alignment with Burrows–Wheeler transform
- (2010) Heng Li et al. BIOINFORMATICS
- Cytoscape 2.8: new features for data integration and network visualization
- (2010) M. E. Smoot et al. BIOINFORMATICS
- Empirical bayes analysis of sequencing-based transcriptional profiling without replicates
- (2010) Zhijin Wu et al. BMC BIOINFORMATICS
- Quantitative analysis of a deeply sequenced marine microbial metatranscriptome
- (2010) Scott M Gifford et al. ISME Journal
- EMILIANIA HUXLEYI(PRYMNESIOPHYCEAE): NITROGEN-METABOLISM GENES AND THEIR EXPRESSION IN RESPONSE TO EXTERNAL NITROGEN SOURCES
- (2010) Annette Bruhn et al. JOURNAL OF PHYCOLOGY
- Transcriptome Profiling of a Toxic Dinoflagellate Reveals a Gene-Rich Protist and a Potential Impact on Gene Expression Due to Bacterial Presence
- (2010) Ahmed Moustafa et al. PLoS One
- Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea
- (2010) J. McCarren et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The coupling of biodiversity and productivity in phytoplankton communities: consequences for biomass stoichiometry
- (2009) Maren Striebel et al. ECOLOGY
- Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon
- (2009) Rachel S. Poretsky et al. ENVIRONMENTAL MICROBIOLOGY
- ESTABLISHMENT OF MINIMAL AND MAXIMAL TRANSCRIPT LEVELS FOR NITRATE TRANSPORTER GENES FOR DETECTING NITROGEN DEFICIENCY IN THE MARINE PHYTOPLANKTON ISOCHRYSIS GALBANA (PRYMNESIOPHYCEAE) AND THALASSIOSIRA PSEUDONANA (BACILLARIOPHYCEAE)1
- (2009) Lee-Kuo Kang et al. JOURNAL OF PHYCOLOGY
- Phytoplankton in the ocean use non-phosphorus lipids in response to phosphorus scarcity
- (2009) Benjamin A. S. Van Mooy et al. NATURE
- Network analyses structure genetic diversity in independent genetic worlds
- (2009) S. Halary et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Multidecadal (1959–1997) changes in Skeletonema abundance and seasonal bloom patterns in Narragansett Bay, Rhode Island, USA
- (2008) David G. Borkman et al. JOURNAL OF SEA RESEARCH
- The Phaeodactylum genome reveals the evolutionary history of diatom genomes
- (2008) Chris Bowler et al. NATURE
- Diversity predicts stability and resource use efficiency in natural phytoplankton communities
- (2008) Robert Ptacnik et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation
- (2008) A. E. Allen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now