Metatranscriptomic analysis of autonomously collected and preserved marine bacterioplankton

Field applications of the second-generation Environmental Sample Processor (ESP) for remote detection of harmful algae: 2006-2007

(2011) Dianne I. Greenfield et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Remote Detection of Marine Microbes, Small Invertebrates, Harmful Algae, and Biotoxins using the Environmental Sample Processor (ESP)

(2011) Christopher Scholin et al.   OCEANOGRAPHY

Constitutive Expression of the Proteorhodopsin Gene by a Flavobacterium Strain Representative of the Proteorhodopsin-Producing Microbial Community in the North Sea

(2010) T. Riedel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Spatial patterns and light-driven variation of microbial population gene expression in surface waters of the oligotrophic open ocean

(2010) Ian Hewson et al.   ENVIRONMENTAL MICROBIOLOGY

Time-series analyses of Monterey Bay coastal microbial picoplankton using a ‘genome proxy’ microarray

(2010) Virginia I. Rich et al.   ENVIRONMENTAL MICROBIOLOGY

Transcriptomic analysis of a marine bacterial community enriched with dimethylsulfoniopropionate

(2010) Maria Vila-Costa et al.   ISME Journal

Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean

(2010) Yanmei Shi et al.   ISME Journal

Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction

(2010) Robert M Morris et al.   ISME Journal

Genome characteristics of a generalist marine bacterial lineage

(2010) Ryan J Newton et al.   ISME Journal

Diversity of active marine picoeukaryotes in the Eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts

(2010) Dikla Man-Aharonovich et al.   ISME Journal

Distinct flavobacterial communities in contrasting water masses of the North Atlantic Ocean

(2010) Paola R Gómez-Pereira et al.   ISME Journal

Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics

(2010) Frank J Stewart et al.   ISME Journal

Mobile autonomous process sampling within coastal ocean observing systems

(2010) J. P. Ryan et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Genomic and functional adaptation in surface ocean planktonic prokaryotes

(2010) Shibu Yooseph et al.   NATURE

Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea

(2010) J. McCarren et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interacting physical, chemical and biological forcing of phytoplankton thin-layer variability in Monterey Bay, California

(2009) John P. Ryan et al.   CONTINENTAL SHELF RESEARCH

Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre

(2009) Rachel S. Poretsky et al.   ENVIRONMENTAL MICROBIOLOGY

Near real-time, autonomous detection of marine bacterioplankton on a coastal mooring in Monterey Bay, California, using rRNA-targeted DNA probes

(2009) Christina M. Preston et al.   ENVIRONMENTAL MICROBIOLOGY

Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon

(2009) Rachel S. Poretsky et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial community genomics in eastern Mediterranean Sea surface waters

(2009) Roi Feingersch et al.   ISME Journal

Systematic artifacts in metagenomes from complex microbial communities

(2009) Vicente Gomez-Alvarez et al.   ISME Journal

Complex Glycan Catabolism by the Human Gut Microbiota: The Bacteroidetes Sus-like Paradigm

(2009) Eric C. Martens et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Metatranscriptomics reveals unique microbial small RNAs in the ocean’s water column

(2009) Yanmei Shi et al.   NATURE

Assembling the Marine Metagenome, One Cell at a Time

(2009) Tanja Woyke et al.   PLoS One

Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas

(2009) A. Z. Worden et al.   SCIENCE

Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea

(2008) Sarah M Sowell et al.   ISME Journal

Simultaneous Assessment of Soil Microbial Community Structure and Function through Analysis of the Meta-Transcriptome

(2008) Tim Urich et al.   PLoS One

Genome analysis of the proteorhodopsin-containing marine bacterium Polaribacter sp. MED152 (Flavobacteria)

(2008) J. M. Gonzalez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial community gene expression in ocean surface waters

(2008) J. Frias-Lopez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

New substrates for TonB-dependent transport: do we only see the ‘tip of the iceberg’?

(2008) Kristine Schauer et al.   TRENDS IN BIOCHEMICAL SCIENCES

Design and testing of ‘genome-proxy’ microarrays to profile marine microbial communities

(2007) Virginia I. Rich et al.   ENVIRONMENTAL MICROBIOLOGY

A robotic molecular method for in situ detection of marine invertebrate larvae

(2007) WILLIAM J. JONES et al.   Molecular Ecology Resources