De Novo Characterization of the Mung Bean Transcriptome and Transcriptomic Analysis of Adventitious Rooting in Seedlings Using RNA-Seq
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
De Novo Characterization of the Mung Bean Transcriptome and Transcriptomic Analysis of Adventitious Rooting in Seedlings Using RNA-Seq
Authors
Keywords
Transcription factors, Gene expression, Auxins, DNA transcription, Biosynthesis, Hypocotyl, Ribosomes, Peroxidases
Journal
PLoS One
Volume 10, Issue 7, Pages e0132969
Publisher
Public Library of Science (PLoS)
Online
2015-07-16
DOI
10.1371/journal.pone.0132969
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The AVRDC – The World Vegetable Center mungbean (Vigna radiata) core and mini core collections
- (2015) Roland Schafleitner et al. BMC GENOMICS
- Transcriptome Analysis of Indole-3-Butyric Acid-Induced Adventitious Root Formation in Nodal Cuttings of Camellia sinensis (L.)
- (2014) Kang Wei et al. PLoS One
- Involvement of abscisic acid in regulating antioxidative defense systems and IAA-oxidase activity and improving adventitious rooting in mung bean [Vigna radiata (L.) Wilczek] seedlings under cadmium stress
- (2013) Shi-Weng Li et al. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH
- Hydrogen Peroxide Is a Second Messenger in the Salicylic Acid-Triggered Adventitious Rooting Process in Mung Bean Seedlings
- (2013) Wei Yang et al. PLoS One
- Transcriptome analysis at four developmental stages of grape berry (Vitis vinifera cv. Shiraz) provides insights into regulated and coordinated gene expression
- (2012) Crystal Sweetman et al. BMC GENOMICS
- Transcriptomic analysis of Chinese bayberry (Myrica rubra) fruit development and ripening using RNA-Seq
- (2012) Chao Feng et al. BMC GENOMICS
- De novo assembly and characterization of the root transcriptome of Aegilops variabilis during an interaction with the cereal cyst nematode
- (2012) De-Lin Xu et al. BMC GENOMICS
- De novo characterization of the Chinese fir (Cunninghamia lanceolata) transcriptome and analysis of candidate genes involved in cellulose and lignin biosynthesis
- (2012) Hua-Hong Huang et al. BMC GENOMICS
- Next generation sequencing and de novo transcriptome analysis of Costus pictus D. Don, a non-model plant with potent anti-diabetic properties
- (2012) Ramasamy S Annadurai et al. BMC GENOMICS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Involvement of alternative oxidase (AOX) in adventitious rooting of Olea europaea L. microshoots is linked to adaptive phenylpropanoid and lignin metabolism
- (2012) E. Santos Macedo et al. PLANT CELL REPORTS
- The AINTEGUMENTA LIKE1 Homeotic Transcription Factor PtAIL1 Controls the Formation of Adventitious Root Primordia in Poplar
- (2012) A. Rigal et al. PLANT PHYSIOLOGY
- LEA Proteins During Water Stress: Not Just for Plants Anymore
- (2011) Steven C. Hand et al. Annual Review of Physiology
- Identification of lignin genes and regulatory sequences involved in secondary cell wall formation in Acacia auriculiformis and Acacia mangium via de novo transcriptome sequencing
- (2011) Melissa ML Wong et al. BMC GENOMICS
- De novo assembly of Euphorbia fischeriana root transcriptome identifies prostratin pathway related genes
- (2011) Roberto A Barrero et al. BMC GENOMICS
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- N-3-Oxo-Decanoyl-L-Homoserine-Lactone Activates Auxin-Induced Adventitious Root Formation via Hydrogen Peroxide- and Nitric Oxide-Dependent Cyclic GMP Signaling in Mung Bean
- (2011) X. Bai et al. PLANT PHYSIOLOGY
- Genome-scale transcriptome analysis of the desert poplar, Populus euphratica
- (2011) Q. Qiu et al. TREE PHYSIOLOGY
- Global gene expression analysis ofin vitroroot formation inMedicago truncatula
- (2010) Peta Holmes et al. FUNCTIONAL PLANT BIOLOGY
- Hormonal interplay during adventitious root formation in flooded tomato plants
- (2010) Maria Laura Vidoz et al. PLANT JOURNAL
- Mechanism of Auxin-Regulated Gene Expression in Plants
- (2009) Elisabeth J. Chapman et al. Annual Review of Genetics
- DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
- (2009) Likun Wang et al. BIOINFORMATICS
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
- Mediators, Genes and Signaling in Adventitious Rooting
- (2009) Shi-Weng Li et al. BOTANICAL REVIEW
- IBA-induced changes in antioxidant enzymes during adventitious rooting in mung bean seedlings: The role of H2O2
- (2009) Shi-Weng Li et al. ENVIRONMENTAL AND EXPERIMENTAL BOTANY
- Phenotypic Plasticity of Adventitious Rooting in Arabidopsis Is Controlled by Complex Regulation of AUXIN RESPONSE FACTOR Transcripts and MicroRNA Abundance
- (2009) L. Gutierrez et al. PLANT CELL
- Genetic dissection of the role of ethylene in regulating auxin-dependent lateral and adventitious root formation in tomato
- (2009) Sangeeta Negi et al. PLANT JOURNAL
- The Cytokinin Type-B Response Regulator PtRR13 Is a Negative Regulator of Adventitious Root Development in Populus
- (2009) G. A. Ramirez-Carvajal et al. PLANT PHYSIOLOGY
- The AUXIN BINDING PROTEIN 1 Is Required for Differential Auxin Responses Mediating Root Growth
- (2009) Alexandre Tromas et al. PLoS One
- Validation of internal control for gene expression study in soybean by quantitative real-time PCR
- (2008) Bo Jian et al. BMC MOLECULAR BIOLOGY
- Transcriptional profiling of Medicago truncatula meristematic root cells
- (2008) Peta Holmes et al. BMC PLANT BIOLOGY
- Hydrogen peroxide acts as a signal molecule in the adventitious root formation of mung bean seedlings
- (2008) S LI et al. ENVIRONMENTAL AND EXPERIMENTAL BOTANY
- Dissection of lignin macromolecular configuration and assembly: Comparison to related biochemical processes in allyl/propenyl phenol and lignan biosynthesis
- (2008) Laurence B. Davin et al. NATURAL PRODUCT REPORTS
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
- Conditional Repression of AUXIN BINDING PROTEIN1 Reveals That It Coordinates Cell Division and Cell Expansion during Postembryonic Shoot Development in Arabidopsis and Tobacco
- (2008) N. Braun et al. PLANT CELL
- Metabolomic and proteomic changes in the xylem sap of maize under drought
- (2008) SOPHIE ALVAREZ et al. PLANT CELL AND ENVIRONMENT
- Caffeic acid affects early growth, and morphogenetic response of hypocotyl cuttings of mung bean (Phaseolus aureus)
- (2007) Daizy R. Batish et al. JOURNAL OF PLANT PHYSIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now