Gut Microbiota Dynamics during Dietary Shift in Eastern African Cichlid Fishes

Diet strongly influences the gut microbiota of surgeonfishes

(2015) Sou Miyake et al.   MOLECULAR ECOLOGY

Do the intestinal microbiotas differ between paddlefish (Polyodon spathala) and bighead carp (Aristichthys nobilis) reared in the same pond?

(2014) X.M. Li et al.   JOURNAL OF APPLIED MICROBIOLOGY

Characterization of the gut microbiota of three commercially valuable warmwater fish species

(2014) A.M. Larsen et al.   JOURNAL OF APPLIED MICROBIOLOGY

Major Histocompatibility Complex class IIb polymorphism influences gut microbiota composition and diversity

(2014) Daniel I. Bolnick et al.   MOLECULAR ECOLOGY

Intestinal microbiota in fishes: what's known and what's not

(2014) Kendall D. Clements et al.   MOLECULAR ECOLOGY

The Gut Microbial Community of Midas Cichlid Fish in Repeatedly Evolved Limnetic-Benthic Species Pairs

(2014) Paolo Franchini et al.   PLoS One

Testing the stages model in the adaptive radiation of cichlid fishes in East African Lake Tanganyika

(2014) M. Muschick et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Teleost microbiomes: the state of the art in their characterization, manipulation and importance in aquaculture and fisheries

(2014) Martin S. Llewellyn et al.   Frontiers in Microbiology

Molecular diversity of thePlanctomycetesin the human gut microbiota in France and Senegal

(2013) Caroline Cayrou et al.   APMIS

Aquacultured Rainbow Trout (Oncorhynchus mykiss) Possess a Large Core Intestinal Microbiota That Is Resistant to Variation in Diet and Rearing Density

(2013) S. Wong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Next generation sequencing shows high variation of the intestinal microbial species composition in Atlantic cod caught at a single location

(2013) Bastiaan Star et al.   BMC MICROBIOLOGY

Taxonomic and functional metagenomic profiling of gastrointestinal tract microbiome of the farmed adult turbot (Scophthalmus maximus)

(2013) Mengxin Xing et al.   FEMS MICROBIOLOGY ECOLOGY

Fish gut microbiota analysis differentiates physiology and behavior of invasive Asian carp and indigenous American fish

(2013) Lin Ye et al.   ISME Journal

Convergence of gut microbiomes in myrmecophagous mammals

(2013) Frédéric Delsuc et al.   MOLECULAR ECOLOGY

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Host Species and Environmental Effects on Bacterial Communities Associated with Drosophila in the Laboratory and in the Natural Environment

(2013) Fabian Staubach et al.   PLoS One

Mom Knows Best: The Universality of Maternal Microbial Transmission

(2013) Lisa J. Funkhouser et al.   PLOS BIOLOGY

The human gut and groundwater harbor non-photosynthetic bacteria belonging to a new candidate phylum sibling to Cyanobacteria

(2013) Sara C Di Rienzi et al.   eLife

Convergent Evolution within an Adaptive Radiation of Cichlid Fishes

(2012) Moritz Muschick et al.   CURRENT BIOLOGY

Diet and phylogeny shape the gut microbiota of Antarctic seals: a comparison of wild and captive animals

(2012) Tiffanie M. Nelson et al.   ENVIRONMENTAL MICROBIOLOGY

Host species as a strong determinant of the intestinal microbiota of fish larvae

(2012) Xuemei Li et al.   JOURNAL OF MICROBIOLOGY

Ecological drift and local exposures drive enteric bacterial community differences within species of Galápagos iguanas

(2012) EMILY W. LANKAU et al.   MOLECULAR ECOLOGY

Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis

(2012) KAREN E. SULLAM et al.   MOLECULAR ECOLOGY

Microbiome analysis among bats describes influences of host phylogeny, life history, physiology and geography

(2012) CALEB D. PHILLIPS et al.   MOLECULAR ECOLOGY

Reciprocal interactions of the intestinal microbiota and immune system

(2012) Craig L. Maynard et al.   NATURE

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

PCR-TTGE Analysis of 16S rRNA from Rainbow Trout (Oncorhynchus mykiss) Gut Microbiota Reveals Host-Specific Communities of Active Bacteria

(2012) Paola Navarrete et al.   PLoS One

Towards an Evolutionary Model of Animal-Associated Microbiomes

(2011) Carl J. Yeoman et al.   Entropy

Evidence for a core gut microbiota in the zebrafish

(2011) Guus Roeselers et al.   ISME Journal

Normal gut microbiota modulates brain development and behavior

(2011) R. D. Heijtz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans

(2011) B. D. Muegge et al.   SCIENCE

Drosophila Microbiome Modulates Host Developmental and Metabolic Homeostasis via Insulin Signaling

(2011) S. C. Shin et al.   SCIENCE

Pyrosequencing of 16S rRNA gene amplicons to study the microbiota in the gastrointestinal tract of carp (Cyprinus carpio L.)

(2011) Maartje AHJ van Kessel et al.   AMB Express

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities

(2010) Howard Ochman et al.   PLOS BIOLOGY

Towards the human intestinal microbiota phylogenetic core

(2009) Julien Tap et al.   ENVIRONMENTAL MICROBIOLOGY

Characterization of the intestinal microbiota of two Antarctic notothenioid fish species

(2009) Naomi L. Ward et al.   EXTREMOPHILES

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

Molecular Analysis of Microbiota Along the Digestive Tract of Juvenile Atlantic Salmon (Salmo salar L.)

(2008) P. Navarrete et al.   MICROBIAL ECOLOGY

The interaction of sexually and naturally selected traits in the adaptive radiations of cichlid fishes

(2008) WALTER SALZBURGER   MOLECULAR ECOLOGY

Tempo and Mode of Diversification of Lake Tanganyika Cichlid Fishes

(2008) Julia J. Day et al.   PLoS One

Evolution of Mammals and Their Gut Microbes

(2008) R. E. Ley et al.   SCIENCE