Algae after dark: mechanisms to cope with anoxic/hypoxic conditions

Redox and ATP control of photosynthetic cyclic electron flow in Chlamydomonas reinhardtii

(2014) Jean Alric   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Combined Increases in Mitochondrial Cooperation and Oxygen Photoreduction Compensate for Deficiency in Cyclic Electron Flow inChlamydomonas reinhardtii

(2014) Kieu-Van Dang et al.   PLANT CELL

Nitric Oxide-Triggered Remodeling of Chloroplast Bioenergetics and Thylakoid Proteins upon Nitrogen Starvation in Chlamydomonas reinhardtii

(2014) L. Wei et al.   PLANT CELL

Alternative Acetate Production Pathways inChlamydomonas reinhardtiiduring Dark Anoxia and the Dominant Role of Chloroplasts in Fermentative Acetate Production

(2014) Wenqiang Yang et al.   PLANT CELL

Proton Gradient Regulation 5-Mediated Cyclic Electron Flow under ATP- or Redox-Limited Conditions: A Study of  ATPase pgr5 and  rbcL pgr5 Mutants in the Green Alga Chlamydomonas reinhardtii

(2014) X. Johnson et al.   PLANT PHYSIOLOGY

Proton Gradient Regulation5-Like1-Mediated Cyclic Electron Flow Is Crucial for Acclimation to Anoxia and Complementary to Nonphotochemical Quenching in Stress Adaptation

(2014) B. Kukuczka et al.   PLANT PHYSIOLOGY

Respiratory-deficient mutants of the unicellular green alga Chlamydomonas: A review

(2013) Thalia Salinas et al.   BIOCHIMIE

Central Carbon Metabolism and Electron Transport in Chlamydomonas reinhardtii: Metabolic Constraints for Carbon Partitioning between Oil and Starch

(2013) Xenie Johnson et al.   EUKARYOTIC CELL

Novel Thylakoid Membrane GreenCut Protein CPLD38 Impacts Accumulation of the Cytochromeb6fComplex and Associated Regulatory Processes

(2013) Mark L. Heinnickel et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Origins and diversity of eukaryotic CO2-concentrating mechanisms: lessons for the future

(2013) Moritz Meyer et al.   JOURNAL OF EXPERIMENTAL BOTANY

COPPER RESPONSE REGULATOR1-Dependent and -Independent Responses of the Chlamydomonas reinhardtii Transcriptome to Dark Anoxia

(2013) A. Hemschemeier et al.   PLANT CELL

Lack of isocitrate lyase inChlamydomonasleads to changes in carbon metabolism and in the response to oxidative stress under mixotrophic growth

(2013) Charlotte Plancke et al.   PLANT JOURNAL

Tiered Regulation of Sulfur Deprivation Responses in Chlamydomonas reinhardtii and Identification of an Associated Regulatory Factor

(2013) M. Aksoy et al.   PLANT PHYSIOLOGY

Function of the Chloroplast Hydrogenase in the Microalga Chlamydomonas: The Role of Hydrogenase and State Transitions during Photosynthetic Activation in Anaerobiosis

(2013) Bart Ghysels et al.   PLoS One

Hypoxic survival requires a 2-on-2 hemoglobin in a process involving nitric oxide

(2013) A. Hemschemeier et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Activation loop phosphorylation of a protein kinase is a molecular marker of organelle size that dynamically reports flagellar length

(2013) M. Cao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Retrograde bilin signaling enablesChlamydomonasgreening and phototrophic survival

(2013) Deqiang Duanmu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cyclic electron flow is redox-controlled but independent of state transition

(2013) Hiroko Takahashi et al.   Nature Communications

Fermentation metabolism and its evolution in algae

(2013) Claudia Catalanotti et al.   Frontiers in Plant Science

Disruption of the acetate kinase (ack) gene of Clostridium acetobutylicum results in delayed acetate production

(2012) Wouter Kuit et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Anaerobic energy metabolism in unicellular photosynthetic eukaryotes

(2012) Ariane Atteia et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Characterization of an internal type-II NADH dehydrogenase from Chlamydomonas reinhardtii mitochondria

(2012) Renaud Lecler et al.   CURRENT GENETICS

Novel FixL homologues inChlamydomonas reinhardtiibind heme and O2

(2012) U.M. Narayana Murthy et al.   FEBS LETTERS

Pyruvate:Ferredoxin Oxidoreductase Is Coupled to Light-independent Hydrogen Production inChlamydomonas reinhardtii

(2012) Jens Noth et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

ATP Synthesis-coupled and -uncoupled Acetate Production from Acetyl-CoA by Mitochondrial Acetate:Succinate CoA-transferase and Acetyl-CoA Thioesterase inTrypanosoma

(2012) Yoann Millerioux et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Artificial microRNA-mediated knockdown of pyruvate formate lyase (PFL1) provides evidence for an active 3-hydroxybutyrate production pathway in the green alga Chlamydomonas reinhardtii

(2012) Steven J. Burgess et al.   JOURNAL OF BIOTECHNOLOGY

Biochemistry and Evolution of Anaerobic Energy Metabolism in Eukaryotes

(2012) M. Muller et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Transcriptome-Wide Changes in Chlamydomonas reinhardtii Gene Expression Regulated by Carbon Dioxide and the CO2-Concentrating Mechanism Regulator CIA5/CCM1

(2012) W. Fang et al.   PLANT CELL

Altered Fermentative Metabolism in Chlamydomonas reinhardtii Mutants Lacking Pyruvate Formate Lyase and Both Pyruvate Formate Lyase and Alcohol Dehydrogenase

(2012) C. Catalanotti et al.   PLANT CELL

A Galactoglycerolipid Lipase Is Required for Triacylglycerol Accumulation and Survival Following Nitrogen Deprivation in Chlamydomonas reinhardtii

(2012) X. Li et al.   PLANT CELL

Differential Expression of the Chlamydomonas [FeFe]-Hydrogenase-Encoding HYDA1 Gene Is Regulated by the COPPER RESPONSE REGULATOR1

(2012) M. Pape et al.   PLANT PHYSIOLOGY

A Mutant in the ADH1 Gene of Chlamydomonas reinhardtii Elicits Metabolic Restructuring during Anaerobiosis

(2012) L. Magneschi et al.   PLANT PHYSIOLOGY

Chlamydomonas reinhardtii Chloroplasts Contain a Homodimeric Pyruvate:Ferredoxin Oxidoreductase That Functions with FDX1

(2012) R. van Lis et al.   PLANT PHYSIOLOGY

Aldehyde dehydrogenase (ALDH) superfamily in plants: gene nomenclature and comparative genomics

(2012) Chad Brocker et al.   PLANTA

Calcium-dependent regulation of cyclic photosynthetic electron transfer by a CAS, ANR1, and PGRL1 complex

(2012) M. Terashima et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Making sense of low oxygen sensing

(2012) Julia Bailey-Serres et al.   TRENDS IN PLANT SCIENCE

Phosphonate Analogs of 2-Oxoglutarate Perturb Metabolism and Gene Expression in Illuminated Arabidopsis Leaves

(2012) Wagner L. Araújo et al.   Frontiers in Plant Science

Genetic disruption of both Chlamydomonas reinhardtii [FeFe]-hydrogenases: Insight into the role of HYDA2 in H2 production

(2011) Jonathan E. Meuser et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

The chloroplast proteome: a survey from the Chlamydomonas reinhardtii perspective with a focus on distinctive features

(2011) Mia Terashima et al.   CURRENT GENETICS

A Forward Genetic Screen Identifies Mutants Deficient for Mitochondrial Complex I Assembly inChlamydomonas reinhardtii

(2011) M. Rosario Barbieri et al.   GENETICS

Visualization of microbodies in Chlamydomonas reinhardtii

(2011) Yasuko Hayashi et al.   JOURNAL OF PLANT RESEARCH

Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants

(2011) Daniel J. Gibbs et al.   NATURE

Oxygen Sensing, Homeostasis, and Disease

(2011) Gregg L. Semenza   NEW ENGLAND JOURNAL OF MEDICINE

Plant Oxygen Sensing Is Mediated by the N-End Rule Pathway: A Milestone in Plant Anaerobiosis

(2011) R. Sasidharan et al.   PLANT CELL

Control of Hydrogen Photoproduction by the Proton Gradient Generated by Cyclic Electron Flow in Chlamydomonas reinhardtii

(2011) D. Tolleter et al.   PLANT CELL

A pyruvate formate lyase-deficient Chlamydomonas reinhardtii strain provides evidence for a link between fermentation and hydrogen production in green algae

(2011) Gabriele Philipps et al.   PLANT JOURNAL

Transient MPK6 activation in response to oxygen deprivation and reoxygenation is mediated by mitochondria and aids seedling survival in Arabidopsis

(2011) Ruth Chang et al.   PLANT MOLECULAR BIOLOGY

Diatoms respire nitrate to survive dark and anoxic conditions

(2011) A. Kamp et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plastid terminal oxidase 2 (PTOX2) is the major oxidase involved in chlororespiration in Chlamydomonas

(2011) L. Houille-Vernes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Boosting Autofermentation Rates and Product Yields with Sodium Stress Cycling: Application to Production of Renewable Fuels by Cyanobacteria

(2010) D. Carrieri et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Loss of mitochondrial ATP synthase subunit beta (Atp2) alters mitochondrial and chloroplastic function and morphology in Chlamydomonas

(2010) Marie Lapaille et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Life in the balance: a signaling network controlling survival of flooding

(2010) Julia Bailey-Serres et al.   CURRENT OPINION IN PLANT BIOLOGY

Anaerobic Expression of the Ferredoxin-EncodingFDX5Gene of Chlamydomonas reinhardtii Is Regulated by the Crr1 Transcription Factor

(2010) Camilla Lambertz et al.   EUKARYOTIC CELL

Acetate formation in the energy metabolism of parasitic helminths and protists

(2010) Aloysius G.M. Tielens et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

The Interplay of Proton, Electron, and Metabolite Supply for Photosynthetic H2Production inChlamydomonas reinhardtii

(2010) Anja Doebbe et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Metabolic and Transcriptional Response to Cofactor Perturbations in Escherichia coli

(2010) Anders K. Holm et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Regulation of hypoxia adaptation: an overlooked virulence attribute of pathogenic fungi?

(2010) Nora Grahl et al.   MEDICAL MYCOLOGY

Characterizing the Anaerobic Response ofChlamydomonas reinhardtiiby Quantitative Proteomics

(2010) Mia Terashima et al.   MOLECULAR & CELLULAR PROTEOMICS

Isolation of the elusive supercomplex that drives cyclic electron flow in photosynthesis

(2010) Masakazu Iwai et al.   NATURE

Alcohol dehydrogenase and hydrogenase transcript fluctuations during a day-night cycle in Chlamydomonas reinhardtii: the role of anoxia

(2010) Larisa Angela Swirsky Whitney et al.   NEW PHYTOLOGIST

Multiple facets of anoxic metabolism and hydrogen production in the unicellular green alga Chlamydomonas reinhardtii

(2010) Arthur R. Grossman et al.   NEW PHYTOLOGIST

Regulation of the molecular response to oxygen limitations in plants

(2010) Francesco Licausi   NEW PHYTOLOGIST

Evolutionary origins of metabolic compartmentalization in eukaryotes

(2010) W. Martin   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Acetate Versus Sulfur Deprivation Role in Creating Anaerobiosis in Light for Hydrogen Production by Chlamydomonas reinhardtii and Spirulina platensis: Two Different Organisms and Two Different Mechanisms

(2010) Fatthy Mohamed Morsy   PHOTOCHEMISTRY AND PHOTOBIOLOGY

Cyclic electron flow around photosystem I in unicellular green algae

(2010) Jean Alric   PHOTOSYNTHESIS RESEARCH

RNA-Seq Analysis of Sulfur-DeprivedChlamydomonasCells Reveals Aspects of Acclimation Critical for Cell Survival

(2010) David González-Ballester et al.   PLANT CELL

The CRR1 Nutritional Copper Sensor inChlamydomonasContains Two Distinct Metal-Responsive Domains

(2010) Frederik Sommer et al.   PLANT CELL

Knock-down of the COX3 and COX17 gene expression of cytochrome c oxidase in the unicellular green alga Chlamydomonas reinhardtii

(2010) Claire Remacle et al.   PLANT MOLECULAR BIOLOGY

Identification and Regulation of Plasma Membrane Sulfate Transporters in Chlamydomonas

(2010) W. Pootakham et al.   PLANT PHYSIOLOGY

The phosphate makes a difference: cellular functions of NADP

(2010) Line Agledal et al.   REDOX REPORT

Heterotrophic cultures of microalgae: Metabolism and potential products

(2010) Octavio Perez-Garcia et al.   WATER RESEARCH

Cytosolic acetyl-CoA synthetase affected tumor cell survival under hypoxia: the possible function in tumor acetyl-CoA/acetate metabolism

(2009) Yukie Yoshii et al.   CANCER SCIENCE

Different Biochemical Mechanisms Ensure Network-Wide Balancing of Reducing Equivalents in Microbial Metabolism

(2009) T. Fuhrer et al.   JOURNAL OF BACTERIOLOGY

Flexibility in Anaerobic Metabolism as Revealed in a Mutant ofChlamydomonas reinhardtiiLacking Hydrogenase Activity

(2009) Alexandra Dubini et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

PGRL1 Participates in Iron-induced Remodeling of the Photosynthetic Apparatus and in Energy Metabolism in Chlamydomonas reinhardtii

(2009) Dimitris Petroutsos et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Pattern of Expression and Substrate Specificity of Chloroplast Ferredoxins fromChlamydomonas reinhardtii

(2009) Aimee M. Terauchi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Regulation by Glutathionylation of Isocitrate Lyase fromChlamydomonas reinhardtii

(2009) Mariette Bedhomme et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

From systems biology to fuel—Chlamydomonas reinhardtii as a model for a systems biology approach to improve biohydrogen production

(2009) Jens Rupprecht   JOURNAL OF BIOTECHNOLOGY

Phylogenetic and molecular analysis of hydrogen-producing green algae

(2009) M. Timmins et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Proteomic Survey of Chlamydomonas reinhardtii Mitochondria Sheds New Light on the Metabolic Plasticity of the Organelle and on the Nature of the  -Proteobacterial Mitochondrial Ancestor

(2009) A. Atteia et al.   MOLECULAR BIOLOGY AND EVOLUTION

Two Chlamydomonas CTR Copper Transporters with a Novel Cys-Met Motif Are Localized to the Plasma Membrane and Function in Copper Assimilation

(2009) M. D. Page et al.   PLANT CELL

Hydrogen Production in Chlamydomonas: Photosystem II-Dependent and -Independent Pathways Differ in Their Requirement for Starch Metabolism

(2009) V. Chochois et al.   PLANT PHYSIOLOGY

Impaired respiration discloses the physiological significance of state transitions in Chlamydomonas

(2009) P. Cardol et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chloroplast proteomics highlights the subcellular compartmentation of lipid metabolism

(2009) Jacques Joyard et al.   PROGRESS IN LIPID RESEARCH

Flooding Stress: Acclimations and Genetic Diversity

(2008) J. Bailey-Serres et al.   Annual Review of Plant Biology

Optimization of Metabolic Capacity and Flux through Environmental Cues To Maximize Hydrogen Production by the Cyanobacterium "Arthrospira (Spirulina) maxima"

(2008) G. Ananyev et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Production of phycocyanin—a pigment with applications in biology, biotechnology, foods and medicine

(2008) Niels T. Eriksen   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

AcpA, a member of the GPR1/FUN34/YaaH membrane protein family, is essential for acetate permease activity in the hyphal fungusAspergillus nidulans

(2008) Xavier Robellet et al.   BIOCHEMICAL JOURNAL

In Chlamydomonas, the loss of ND5 subunit prevents the assembly of whole mitochondrial complex I and leads to the formation of a low abundant 700 kDa subcomplex

(2008) Pierre Cardol et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Hydrogen photoproduction by nutrient-deprivedChlamydomonas reinhardtiicells immobilized within thin alginate films under aerobic and anaerobic conditions

(2008) Sergey N. Kosourov et al.   BIOTECHNOLOGY AND BIOENGINEERING

Photobiological hydrogen-producing systems

(2008) Maria Lucia Ghirardi et al.   CHEMICAL SOCIETY REVIEWS

A novel, anaerobically induced ferredoxin inChlamydomonas reinhardtii

(2008) Jessica Jacobs et al.   FEBS LETTERS

Genetic Interactions Between Regulators of Chlamydomonas Phosphorus and Sulfur Deprivation Responses

(2008) J. L. Moseley et al.   GENETICS

Proton-translocating transhydrogenase: an update of unsolved and controversial issues

(2008) Anders Pedersen et al.   JOURNAL OF BIOENERGETICS AND BIOMEMBRANES

Metabolic engineering of the non-sporulating, non-solventogenic Clostridium acetobutylicum strain M5 to produce butanol without acetone demonstrate the robustness of the acid-formation pathways and the importance of the electron balance

(2008) Ryan Sillers et al.   METABOLIC ENGINEERING

ADP-Glucose Pyrophosphorylase-Deficient Pea Embryos Reveal Specific Transcriptional and Metabolic Changes of Carbon-Nitrogen Metabolism and Stress Responses

(2008) K. Weigelt et al.   PLANT PHYSIOLOGY

A type II NAD(P)H dehydrogenase mediates light-independent plastoquinone reduction in the chloroplast of Chlamydomonas

(2008) F. Jans et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Contribution of the GABA shunt to hypoxia-induced alanine accumulation in roots of Arabidopsis thaliana

(2007) Y. Miyashita et al.   PLANT AND CELL PHYSIOLOGY